Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relBE/YafQ-DinJ |
| Location | 14946..15511 | Replicon | chromosome |
| Accession | NZ_CP102541 | ||
| Organism | Bifidobacterium longum subsp. infantis strain BB-02 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | - |
| Locus tag | NUU11_RS00055 | Protein ID | WP_234895543.1 |
| Coordinates | 14946..15161 (-) | Length | 72 a.a. |
Antitoxin (Protein)
| Gene name | relB | Uniprot ID | B7GSH1 |
| Locus tag | NUU11_RS00060 | Protein ID | WP_012576473.1 |
| Coordinates | 15233..15511 (-) | Length | 93 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NUU11_RS00035 (NUU11_00035) | 10155..10721 | + | 567 | WP_032743433.1 | DUF3566 domain-containing protein | - |
| NUU11_RS00040 (NUU11_00040) | 11367..12788 | + | 1422 | WP_071477783.1 | ATP-binding protein | - |
| NUU11_RS00045 (NUU11_00045) | 12849..13073 | - | 225 | WP_060620314.1 | substrate-binding domain-containing protein | - |
| NUU11_RS00050 (NUU11_00050) | 13224..14570 | - | 1347 | WP_193641811.1 | NADP-specific glutamate dehydrogenase | - |
| NUU11_RS00055 (NUU11_00055) | 14946..15161 | - | 216 | WP_234895543.1 | type II toxin-antitoxin system YafQ family toxin | Toxin |
| NUU11_RS00060 (NUU11_00060) | 15233..15511 | - | 279 | WP_012576473.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin |
| NUU11_RS00065 (NUU11_00065) | 15985..16212 | - | 228 | WP_212105774.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | - |
| NUU11_RS00070 (NUU11_00070) | 16315..16959 | + | 645 | WP_212104116.1 | hypothetical protein | - |
| NUU11_RS00075 (NUU11_00075) | 17381..17935 | - | 555 | WP_187324443.1 | hypothetical protein | - |
| NUU11_RS00090 (NUU11_00090) | 19050..20312 | - | 1263 | WP_212104118.1 | metallophosphoesterase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|