253805

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) phd-doc/Fic(toxin)
Location 6617674..6618239 Replicon chromosome
Accession NZ_CP102512
Organism Streptomyces sp. CA-210063

Toxin (Protein)


Gene name doc Uniprot ID -
Locus tag JIX56_RS28955 Protein ID WP_257544913.1
Coordinates 6617871..6618239 (+) Length 123 a.a.

Antitoxin (Protein)


Gene name phd Uniprot ID -
Locus tag JIX56_RS28950 Protein ID WP_124441851.1
Coordinates 6617674..6617871 (+) Length 66 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JIX56_RS28930 (JIX56_28930) 6612828..6615143 + 2316 WP_257544910.1 molybdopterin-dependent oxidoreductase -
JIX56_RS28935 (JIX56_28935) 6615386..6615823 + 438 Protein_5726 SUKH-4 family immunity protein -
JIX56_RS28945 (JIX56_28945) 6616169..6617641 + 1473 WP_257544912.1 MFS transporter -
JIX56_RS28950 (JIX56_28950) 6617674..6617871 + 198 WP_124441851.1 hypothetical protein Antitoxin
JIX56_RS28955 (JIX56_28955) 6617871..6618239 + 369 WP_257544913.1 Fic family protein Toxin
JIX56_RS28960 (JIX56_28960) 6618422..6620215 + 1794 WP_257544915.1 DEAD/DEAH box helicase -
JIX56_RS28965 (JIX56_28965) 6620546..6621187 + 642 WP_257544917.1 helix-turn-helix domain-containing protein -
JIX56_RS28970 (JIX56_28970) 6621265..6622086 - 822 WP_257544918.1 alpha/beta hydrolase -
JIX56_RS28975 (JIX56_28975) 6622170..6622646 + 477 WP_257544919.1 MarR family winged helix-turn-helix transcriptional regulator -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Fido domain

(12-80)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 123 a.a.        Molecular weight: 13736.60 Da        Isoelectric Point: 4.8288

>T253805 WP_257544913.1 NZ_CP102512:6617871-6618239 [Streptomyces sp. CA-210063]
MHYLTMPELLNLAQRLGADEVRDYGLLDSALARPQSSVFGQDAYPDVWQKAAALMESLARNHALVDGNKRIAWYATWVYL
HMNGHPLDVDFDVDEAEHFVLDVCQGALDVPKIAAQLPRFAR

Download         Length: 369 bp

Antitoxin


Download         Length: 66 a.a.        Molecular weight: 7190.06 Da        Isoelectric Point: 5.5760

>AT253805 WP_124441851.1 NZ_CP102512:6617674-6617871 [Streptomyces sp. CA-210063]
MAGLNLRFTDEELDALRERAAAEGRSMQAFAHDAVIAAINEHSRLFNEAAEHVLKASAELNRRLA

Download         Length: 198 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References