Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relB-parE/ParE-RHH
Location 7773..8353 Replicon plasmid pS270V-3
Accession NZ_CP102195
Organism Klebsiella pneumoniae strain S270v

Toxin (Protein)


Gene name parE Uniprot ID A0A8J3DTL7
Locus tag NQZ65_RS28200 Protein ID WP_071177730.1
Coordinates 7773..8087 (-) Length 105 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID A0A2X1PRM1
Locus tag NQZ65_RS28205 Protein ID WP_000093040.1
Coordinates 8075..8353 (-) Length 93 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NQZ65_RS28175 (NQZ65_28180) 3717..5681 + 1965 WP_071177727.1 TraM recognition domain-containing protein -
NQZ65_RS28180 (NQZ65_28185) 5681..6412 + 732 WP_071177728.1 MobC family replication-relaxation protein -
NQZ65_RS28185 (NQZ65_28190) 6419..6949 + 531 WP_071177729.1 hypothetical protein -
NQZ65_RS28190 (NQZ65_28195) 6976..7155 - 180 WP_000165970.1 Rop family plasmid primer RNA-binding protein -
NQZ65_RS28195 (NQZ65_28200) 7181..7609 - 429 WP_001140599.1 hypothetical protein -
NQZ65_RS28200 (NQZ65_28205) 7773..8087 - 315 WP_071177730.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
NQZ65_RS28205 (NQZ65_28210) 8075..8353 - 279 WP_000093040.1 CopG family ribbon-helix-helix protein Antitoxin
NQZ65_RS28210 (NQZ65_28215) 8528..8893 - 366 WP_072354022.1 TonB family protein -
NQZ65_RS28215 (NQZ65_28220) 8890..9261 - 372 WP_001237044.1 cell envelope integrity protein TolA -
NQZ65_RS28220 (NQZ65_28225) 9535..9780 - 246 WP_032440458.1 hypothetical protein -
NQZ65_RS28225 (NQZ65_28230) 10425..11912 + 1488 WP_004178082.1 group II intron reverse transcriptase/maturase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Non-Mobilizable plasmid - - 1..11970 11970


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(4-96)

Antitoxin

Ribbon-helix-helix protein, CopG

(5-42)


Sequences

Toxin        


Download         Length: 105 a.a.        Molecular weight: 11805.73 Da        Isoelectric Point: 9.8324

>T253341 WP_071177730.1 NZ_CP102195:c8087-7773 [Klebsiella pneumoniae]
MPQVTISALAQRDLQRLQDFLKTKNRLAARKGGEVIVRAIQQLKTLPDIGRPVPFLPLEYKELVIGFGDSGYVMLYRHDR
EMDQIVIVTVRHQKESGYPGADSL

Download         Length: 315 bp

Antitoxin


Download         Length: 93 a.a.        Molecular weight: 10709.73 Da        Isoelectric Point: 4.7561

>AT253341 WP_000093040.1 NZ_CP102195:c8353-8075 [Klebsiella pneumoniae]
MSSATSIRLDEELKDRLKTLADDRHRSAHALMLEAITEYIDREEKRSQYLRDGQAAWQHYQETGLHLTAEEAEAWISTWG
TENEQDAPPCHR

Download         Length: 279 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure
AlphaFold DB A0A2X1PRM1

References