Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | relBE/RelE(toxin) |
Location | 597095..597581 | Replicon | chromosome |
Accession | NZ_CP102154 | ||
Organism | Streptococcus suis strain SS15055_N2_C15 |
Toxin (Protein)
Gene name | relE | Uniprot ID | D5AGV2 |
Locus tag | NQZ87_RS02975 | Protein ID | WP_011922754.1 |
Coordinates | 597312..597581 (+) | Length | 90 a.a. |
Antitoxin (Protein)
Gene name | relB | Uniprot ID | D5AGV1 |
Locus tag | NQZ87_RS02970 | Protein ID | WP_002938604.1 |
Coordinates | 597095..597322 (+) | Length | 76 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
NQZ87_RS02945 (NQZ87_02945) | 592138..592587 | - | 450 | WP_009909619.1 | MarR family transcriptional regulator | - |
NQZ87_RS02950 (NQZ87_02950) | 592881..593728 | + | 848 | WP_087892711.1 | IS630 family transposase | - |
NQZ87_RS02955 (NQZ87_02955) | 593787..594284 | + | 498 | WP_011922751.1 | DUF5590 domain-containing protein | - |
NQZ87_RS02960 (NQZ87_02960) | 594281..595462 | + | 1182 | WP_011922154.1 | pyridoxal phosphate-dependent aminotransferase | - |
NQZ87_RS02965 (NQZ87_02965) | 595477..596823 | + | 1347 | WP_011922752.1 | asparagine--tRNA ligase | - |
NQZ87_RS02970 (NQZ87_02970) | 597095..597322 | + | 228 | WP_002938604.1 | DUF6290 family protein | Antitoxin |
NQZ87_RS02975 (NQZ87_02975) | 597312..597581 | + | 270 | WP_011922754.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
NQZ87_RS02980 (NQZ87_02980) | 597987..599306 | + | 1320 | WP_012775027.1 | MATE family efflux transporter | - |
NQZ87_RS02985 (NQZ87_02985) | 599357..599734 | + | 378 | WP_002937263.1 | RidA family protein | - |
NQZ87_RS02990 (NQZ87_02990) | 599756..600643 | + | 888 | WP_011922160.1 | RNase adapter RapZ | - |
NQZ87_RS02995 (NQZ87_02995) | 600640..601614 | + | 975 | WP_002937257.1 | YvcK family protein | - |
NQZ87_RS03000 (NQZ87_03000) | 601611..602528 | + | 918 | WP_002937252.1 | DNA-binding protein WhiA | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Structures
Toxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A126UKS2 |
Antitoxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A140EXF0 |