Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/-
Location 1963708..1964132 Replicon chromosome
Accession NZ_CP102085
Organism Mycoavidus sp. SF9855

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag NQD60_RS07895 Protein ID WP_257100368.1
Coordinates 1963857..1964132 (+) Length 92 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag NQD60_RS07890 Protein ID WP_257100367.1
Coordinates 1963708..1963857 (+) Length 50 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NQD60_RS07865 (NQD60_07865) 1958944..1959111 + 168 WP_257100364.1 hypothetical protein -
NQD60_RS07870 (NQD60_07870) 1959301..1960623 + 1323 WP_257100365.1 IS5 family transposase -
NQD60_RS07875 (NQD60_07875) 1960585..1961832 - 1248 Protein_1526 IS3 family transposase -
NQD60_RS07880 (NQD60_07880) 1961894..1962244 - 351 Protein_1527 IS5 family transposase -
NQD60_RS07885 (NQD60_07885) 1962579..1963073 + 495 WP_257100366.1 peptidylprolyl isomerase -
NQD60_RS07890 (NQD60_07890) 1963708..1963857 + 150 WP_257100367.1 hypothetical protein Antitoxin
NQD60_RS07895 (NQD60_07895) 1963857..1964132 + 276 WP_257100368.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
NQD60_RS07900 (NQD60_07900) 1964206..1964523 + 318 WP_257100369.1 hypothetical protein -
NQD60_RS07905 (NQD60_07905) 1964526..1965758 + 1233 WP_257100370.1 MFS transporter -
NQD60_RS07910 (NQD60_07910) 1965974..1966651 + 678 WP_257100371.1 GNAT family N-acetyltransferase -
NQD60_RS07915 (NQD60_07915) 1966605..1967057 - 453 Protein_1534 plasmid pRiA4b ORF-3 family protein -
NQD60_RS07920 (NQD60_07920) 1967435..1968856 + 1422 WP_257100372.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(3-90)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 92 a.a.        Molecular weight: 10690.21 Da        Isoelectric Point: 7.4009

>T253161 WP_257100368.1 NZ_CP102085:1963857-1964132 [Mycoavidus sp. SF9855]
MEVKWTSKALAELGRLYEFLASVSQSAAAHVIQSLTAALARLQVNPRIGERFEEFDPREVRRIFVGHYEMRYEIQGSTLY
ILRLWHTREDH

Download         Length: 276 bp

Antitoxin


Download         Length: 50 a.a.        Molecular weight: 5517.17 Da        Isoelectric Point: 3.8797

>AT253161 WP_257100367.1 NZ_CP102085:1963708-1963857 [Mycoavidus sp. SF9855]
MLGLPQEEERSRLTYEALADVETGQVIDYQAVQAWANSLSTDQILPLPR

Download         Length: 150 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References