252769

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 4689142..4689503 Replicon chromosome
Accession NZ_CP101847
Organism Xanthomonas oryzae pv. oryzae strain YNCX

Toxin (Protein)


Gene name EcnB Uniprot ID G7TLC7
Locus tag NO935_RS21760 Protein ID WP_011257368.1
Coordinates 4689142..4689276 (-) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID G7TLC8
Locus tag NO935_RS21765 Protein ID WP_011407410.1
Coordinates 4689351..4689503 (-) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NO935_RS21745 (NO935_21745) 4686159..4687103 - 945 WP_053503275.1 MBL fold metallo-hydrolase -
NO935_RS21750 (NO935_21750) 4687234..4688523 - 1290 WP_024744479.1 tryptophan--tRNA ligase -
NO935_RS21755 (NO935_21755) 4688692..4688901 - 210 WP_053503274.1 CsbD family protein -
NO935_RS21760 (NO935_21760) 4689142..4689276 - 135 WP_011257368.1 entericidin A/B family lipoprotein Toxin
NO935_RS21765 (NO935_21765) 4689351..4689503 - 153 WP_011407410.1 entericidin A/B family lipoprotein Antitoxin
NO935_RS21770 (NO935_21770) 4689611..4690534 - 924 WP_103057389.1 arginase -
NO935_RS21775 (NO935_21775) 4690856..4691074 + 219 Protein_4162 hypothetical protein -
NO935_RS21780 (NO935_21780) 4691066..4691530 + 465 Protein_4163 hypothetical protein -
NO935_RS21785 (NO935_21785) 4691527..4692069 + 543 Protein_4164 GTPase -
NO935_RS21790 (NO935_21790) 4692549..4693232 + 684 WP_011257363.1 dTMP kinase -
NO935_RS21795 (NO935_21795) 4693430..4694193 + 764 WP_094187715.1 IS5 family transposase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4457.33 Da        Isoelectric Point: 10.2040

>T252769 WP_011257368.1 NZ_CP101847:c4689276-4689142 [Xanthomonas oryzae pv. oryzae]
MKRAIVLLVLSMLSVGLLSGCNTVAGAGKDVKGAGEKVEDAARK

Download         Length: 135 bp

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5046.99 Da        Isoelectric Point: 8.7942

>AT252769 WP_011407410.1 NZ_CP101847:c4689503-4689351 [Xanthomonas oryzae pv. oryzae]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDLQGAGGKVEKTAEKCSDGKC

Download         Length: 153 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0C5UG40

Antitoxin

Source ID Structure
AlphaFold DB A0A0C5V759

References