252700

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) hipBA/HipA-HipB
Location 2743328..2744916 Replicon chromosome
Accession NZ_CP101784
Organism Klebsiella pneumoniae strain hvKP841

Toxin (Protein)


Gene name hipA Uniprot ID A0A0H3GN97
Locus tag NPJ85_RS13620 Protein ID WP_004199851.1
Coordinates 2743328..2744650 (-) Length 441 a.a.

Antitoxin (Protein)


Gene name hipB Uniprot ID A0A0H3GXD8
Locus tag NPJ85_RS13625 Protein ID WP_002904790.1
Coordinates 2744650..2744916 (-) Length 89 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NPJ85_RS13605 (NPJ85_13605) 2738393..2740894 + 2502 WP_004199853.1 fimbria/pilus outer membrane usher protein -
NPJ85_RS13610 (NPJ85_13610) 2740882..2741886 + 1005 WP_004199852.1 fimbrial protein -
NPJ85_RS13615 (NPJ85_13615) 2742019..2743311 + 1293 WP_002904794.1 glycoside hydrolase family 10 protein -
NPJ85_RS13620 (NPJ85_13620) 2743328..2744650 - 1323 WP_004199851.1 type II toxin-antitoxin system HipA family toxin Toxin
NPJ85_RS13625 (NPJ85_13625) 2744650..2744916 - 267 WP_002904790.1 type II toxin-antitoxin system antitoxin HipB Antitoxin
NPJ85_RS13630 (NPJ85_13630) 2745182..2745508 - 327 WP_002904788.1 hydroxyisourate hydrolase -
NPJ85_RS13635 (NPJ85_13635) 2745505..2746005 - 501 WP_002904787.1 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase -
NPJ85_RS13640 (NPJ85_13640) 2745983..2747362 - 1380 WP_004199850.1 nucleobase:cation symporter-2 family protein -
NPJ85_RS13645 (NPJ85_13645) 2747708..2748862 + 1155 WP_002904783.1 FAD-dependent urate hydroxylase HpxO -
NPJ85_RS13650 (NPJ85_13650) 2748843..2749766 - 924 WP_004199849.1 LysR family hpxDE operon transcriptional regulator HpxR -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

HipA-like, C-terminal

(149-402)

Antitoxin

Cro/C1-type helix-turn-helix domain

(16-65)


Sequences

Toxin        


Download         Length: 441 a.a.        Molecular weight: 49128.44 Da        Isoelectric Point: 7.2487

>T252700 WP_004199851.1 NZ_CP101784:c2744650-2743328 [Klebsiella pneumoniae]
MATLTTWMNNVRVGTLTRQANGAHSFRYDEEWLRSPRARPLSLSLPLQYGNITADAVYHYFDNLLPDSPQVRDRIVRRYQ
ARSKQPFDLLAEVGRDSVGAVTLLPPGEEAHLEGLRWQTLDEAQLTALLTAYQSDIPLGMITSQDDFRISVAGAQEKTAL
LRMGEQWCIPQGATPTTHIIKLPIGEIKQPNATLDLRESVDNEYLCLALARELGLAVPEAEIITTPRIRALAVTRFDRRW
AQEGRVLLRLPQEDLCQAFGLPSAMKYESDGGPGIAAIMTFLLGSSEALKDRYDFMKFMVFQWLTGATDGHAKNFSIYLL
PGGSYRLTPFYDIISAFPVLGGTGLHLRDLKLSMGLNATKGRKTEINAIYPRHFLATAKAVNFPLEQMLAILQEFAGHVP
QAIESARRTLPADFSSHVWQAITENMLKLHARLQQGLQAL

Download         Length: 1323 bp

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 9906.27 Da        Isoelectric Point: 8.5912

>AT252700 WP_002904790.1 NZ_CP101784:c2744916-2744650 [Klebsiella pneumoniae]
MNSPQIYSPVQLANYLKLLRQQNHWTQDALARRIGIKQATLSNFENHPDKTTLTTLFKILQSLGVVMTLNAKAAETAPAP
DNNTDLDW

Download         Length: 267 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0H3GN97

Antitoxin

Source ID Structure
AlphaFold DB A0A0H3GXD8

References