252552

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 4262780..4263141 Replicon chromosome
Accession NZ_CP101719
Organism Xanthomonas oryzae pv. oryzae strain CIX2779

Toxin (Protein)


Gene name EcnB Uniprot ID G7TLC7
Locus tag NO430_RS19690 Protein ID WP_011257368.1
Coordinates 4262780..4262914 (-) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID G7TLC8
Locus tag NO430_RS19695 Protein ID WP_011407410.1
Coordinates 4262989..4263141 (-) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NO430_RS19675 (NO430_19675) 4259797..4260741 - 945 WP_024744480.1 MBL fold metallo-hydrolase -
NO430_RS19680 (NO430_19680) 4260872..4262161 - 1290 WP_024744479.1 tryptophan--tRNA ligase -
NO430_RS19685 (NO430_19685) 4262330..4262539 - 210 WP_024744478.1 CsbD family protein -
NO430_RS19690 (NO430_19690) 4262780..4262914 - 135 WP_011257368.1 entericidin A/B family lipoprotein Toxin
NO430_RS19695 (NO430_19695) 4262989..4263141 - 153 WP_011407410.1 entericidin A/B family lipoprotein Antitoxin
NO430_RS19700 (NO430_19700) 4263249..4264172 - 924 WP_053512953.1 arginase -
NO430_RS19705 (NO430_19705) 4264494..4264712 + 219 Protein_3735 hypothetical protein -
NO430_RS19710 (NO430_19710) 4264704..4265159 + 456 Protein_3736 hypothetical protein -
NO430_RS19715 (NO430_19715) 4265156..4265698 + 543 WP_024744475.1 GTPase -
NO430_RS19720 (NO430_19720) 4266214..4266897 + 684 WP_024744474.1 dTMP kinase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4457.33 Da        Isoelectric Point: 10.2040

>T252552 WP_011257368.1 NZ_CP101719:c4262914-4262780 [Xanthomonas oryzae pv. oryzae]
MKRAIVLLVLSMLSVGLLSGCNTVAGAGKDVKGAGEKVEDAARK

Download         Length: 135 bp

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5046.99 Da        Isoelectric Point: 8.7942

>AT252552 WP_011407410.1 NZ_CP101719:c4263141-4262989 [Xanthomonas oryzae pv. oryzae]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDLQGAGGKVEKTAEKCSDGKC

Download         Length: 153 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0C5UG40

Antitoxin

Source ID Structure
AlphaFold DB A0A0C5V759

References