252523

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 4862169..4862519 Replicon chromosome
Accession NZ_CP101704
Organism Xanthomonas oryzae pv. oryzae strain CIX4462

Toxin (Protein)


Gene name EcnB Uniprot ID G7TLC7
Locus tag NO461_RS22725 Protein ID WP_011257368.1
Coordinates 4862169..4862303 (-) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID G7TLC8
Locus tag NO461_RS22730 Protein ID WP_011407410.1
Coordinates 4862367..4862519 (-) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NO461_RS22710 (NO461_22710) 4859183..4860127 - 945 WP_080493520.1 MBL fold metallo-hydrolase -
NO461_RS22715 (NO461_22715) 4860258..4861547 - 1290 WP_011257370.1 tryptophan--tRNA ligase -
NO461_RS22720 (NO461_22720) 4861716..4861925 - 210 WP_011407411.1 CsbD family protein -
NO461_RS22725 (NO461_22725) 4862169..4862303 - 135 WP_011257368.1 entericidin A/B family lipoprotein Toxin
NO461_RS22730 (NO461_22730) 4862367..4862519 - 153 WP_011407410.1 entericidin A/B family lipoprotein Antitoxin
NO461_RS22735 (NO461_22735) 4862627..4863550 - 924 WP_011407409.1 arginase -
NO461_RS22740 (NO461_22740) 4863872..4864090 + 219 Protein_4357 hypothetical protein -
NO461_RS22745 (NO461_22745) 4864082..4864546 + 465 Protein_4358 hypothetical protein -
NO461_RS22750 (NO461_22750) 4864543..4865085 + 543 Protein_4359 GTPase -
NO461_RS22755 (NO461_22755) 4865565..4866248 + 684 WP_011257363.1 dTMP kinase -
NO461_RS22760 (NO461_22760) 4866441..4867204 + 764 WP_094187715.1 IS5 family transposase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4457.33 Da        Isoelectric Point: 10.2040

>T252523 WP_011257368.1 NZ_CP101704:c4862303-4862169 [Xanthomonas oryzae pv. oryzae]
MKRAIVLLVLSMLSVGLLSGCNTVAGAGKDVKGAGEKVEDAARK

Download         Length: 135 bp

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5046.99 Da        Isoelectric Point: 8.7942

>AT252523 WP_011407410.1 NZ_CP101704:c4862519-4862367 [Xanthomonas oryzae pv. oryzae]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDLQGAGGKVEKTAEKCSDGKC

Download         Length: 153 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0C5UG40

Antitoxin

Source ID Structure
AlphaFold DB A0A0C5V759

References