252519

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 4819850..4820200 Replicon chromosome
Accession NZ_CP101703
Organism Xanthomonas oryzae pv. oryzae strain CIX4506

Toxin (Protein)


Gene name EcnB Uniprot ID G7TLC7
Locus tag NO458_RS22455 Protein ID WP_011257368.1
Coordinates 4819850..4819984 (-) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID G7TLC8
Locus tag NO458_RS22460 Protein ID WP_011407410.1
Coordinates 4820048..4820200 (-) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NO458_RS22440 (NO458_22445) 4816864..4817808 - 945 WP_080493520.1 MBL fold metallo-hydrolase -
NO458_RS22445 (NO458_22450) 4817939..4819228 - 1290 WP_011257370.1 tryptophan--tRNA ligase -
NO458_RS22450 (NO458_22455) 4819397..4819606 - 210 WP_011407411.1 CsbD family protein -
NO458_RS22455 (NO458_22460) 4819850..4819984 - 135 WP_011257368.1 entericidin A/B family lipoprotein Toxin
NO458_RS22460 (NO458_22465) 4820048..4820200 - 153 WP_011407410.1 entericidin A/B family lipoprotein Antitoxin
NO458_RS22465 (NO458_22470) 4820308..4821231 - 924 WP_011407409.1 arginase -
NO458_RS22470 (NO458_22475) 4821553..4821771 + 219 Protein_4303 hypothetical protein -
NO458_RS22475 (NO458_22480) 4821763..4822227 + 465 Protein_4304 hypothetical protein -
NO458_RS22480 (NO458_22485) 4822224..4822766 + 543 Protein_4305 GTPase -
NO458_RS22485 (NO458_22490) 4823246..4823929 + 684 WP_011257363.1 dTMP kinase -
NO458_RS22490 (NO458_22495) 4824122..4824885 + 764 WP_094187715.1 IS5 family transposase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4457.33 Da        Isoelectric Point: 10.2040

>T252519 WP_011257368.1 NZ_CP101703:c4819984-4819850 [Xanthomonas oryzae pv. oryzae]
MKRAIVLLVLSMLSVGLLSGCNTVAGAGKDVKGAGEKVEDAARK

Download         Length: 135 bp

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5046.99 Da        Isoelectric Point: 8.7942

>AT252519 WP_011407410.1 NZ_CP101703:c4820200-4820048 [Xanthomonas oryzae pv. oryzae]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDLQGAGGKVEKTAEKCSDGKC

Download         Length: 153 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0C5UG40

Antitoxin

Source ID Structure
AlphaFold DB A0A0C5V759

References