252515

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 4856326..4856676 Replicon chromosome
Accession NZ_CP101702
Organism Xanthomonas oryzae pv. oryzae strain CIX4509

Toxin (Protein)


Gene name EcnB Uniprot ID G7TLC7
Locus tag NO460_RS22620 Protein ID WP_011257368.1
Coordinates 4856326..4856460 (-) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID G7TLC8
Locus tag NO460_RS22625 Protein ID WP_011407410.1
Coordinates 4856524..4856676 (-) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NO460_RS22605 (NO460_22610) 4853340..4854284 - 945 WP_080493520.1 MBL fold metallo-hydrolase -
NO460_RS22610 (NO460_22615) 4854415..4855704 - 1290 WP_011257370.1 tryptophan--tRNA ligase -
NO460_RS22615 (NO460_22620) 4855873..4856082 - 210 WP_011407411.1 CsbD family protein -
NO460_RS22620 (NO460_22625) 4856326..4856460 - 135 WP_011257368.1 entericidin A/B family lipoprotein Toxin
NO460_RS22625 (NO460_22630) 4856524..4856676 - 153 WP_011407410.1 entericidin A/B family lipoprotein Antitoxin
NO460_RS22630 (NO460_22635) 4856784..4857707 - 924 WP_011407409.1 arginase -
NO460_RS22635 (NO460_22640) 4858029..4858247 + 219 Protein_4336 hypothetical protein -
NO460_RS22640 (NO460_22645) 4858239..4858703 + 465 Protein_4337 hypothetical protein -
NO460_RS22645 (NO460_22650) 4858700..4859242 + 543 Protein_4338 GTPase -
NO460_RS22650 (NO460_22655) 4859722..4860405 + 684 WP_011257363.1 dTMP kinase -
NO460_RS22655 (NO460_22660) 4860598..4861361 + 764 WP_094187715.1 IS5 family transposase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4457.33 Da        Isoelectric Point: 10.2040

>T252515 WP_011257368.1 NZ_CP101702:c4856460-4856326 [Xanthomonas oryzae pv. oryzae]
MKRAIVLLVLSMLSVGLLSGCNTVAGAGKDVKGAGEKVEDAARK

Download         Length: 135 bp

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5046.99 Da        Isoelectric Point: 8.7942

>AT252515 WP_011407410.1 NZ_CP101702:c4856676-4856524 [Xanthomonas oryzae pv. oryzae]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDLQGAGGKVEKTAEKCSDGKC

Download         Length: 153 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0C5UG40

Antitoxin

Source ID Structure
AlphaFold DB A0A0C5V759

References