Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/RelE(toxin)
Location 3662654..3663326 Replicon chromosome
Accession NC_015559
Organism Marinomonas posidonica IVIA-Po-181

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag MAR181_RS16880 Protein ID WP_013797813.1
Coordinates 3662952..3663326 (-) Length 125 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag MAR181_RS16875 Protein ID WP_013797812.1
Coordinates 3662654..3662959 (-) Length 102 a.a.

Genomic Context

MAR181_RS16860MAR181_RS16870MAR181_RS16885MAR181_RS16865MAR181_RS16875MAR181_RS16880MAR181_RS16890MAR181_RS16895
Location: 3658413..3660206 (1794 bp)
Type: Others
Protein ID: WP_144011345.1
Location: 3661539..3662426 (888 bp)
Type: Others
Protein ID: WP_013797811.1
Location: 3663498..3664436 (939 bp)
Type: Others
Protein ID: WP_013797814.1
Location: 3660309..3661427 (1119 bp)
Type: Others
Protein ID: WP_013797810.1
Location: 3662654..3662959 (306 bp)
Type: Antitoxin
Protein ID: WP_013797812.1
Location: 3662952..3663326 (375 bp)
Type: Toxin
Protein ID: WP_013797813.1
Location: 3664638..3665357 (720 bp)
Type: Others
Protein ID: WP_013797815.1
Location: 3665388..3666746 (1359 bp)
Type: Others
Protein ID: WP_013797816.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
MAR181_RS168603658413..3660206+1794WP_144011345.1allophanate hydrolase-
MAR181_RS168653660309..3661427-1119WP_013797810.1FAD-dependent monooxygenase-
MAR181_RS168703661539..3662426+888WP_013797811.1LysR family transcriptional regulator-
MAR181_RS168753662654..3662959-306WP_013797812.1DNA-binding transcriptional regulatorAntitoxin
MAR181_RS168803662952..3663326-375WP_013797813.1type II toxin-antitoxin system RelE/ParE family toxinToxin
MAR181_RS168853663498..3664436+939WP_013797814.1hypothetical protein-
MAR181_RS168903664638..3665357-720WP_013797815.1single-stranded DNA-binding protein-
MAR181_RS168953665388..3666746-1359WP_013797816.1MFS transporter-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin HigB-2

(1-120)

Antitoxin

Cro/C1-type helix-turn-helix domain

(43-89)


Sequences

Toxin        


Download         Length: 125 a.a.        Molecular weight: 13823.98 Da        Isoelectric Point: 10.2474

>T25238 WP_013797813.1 NC_015559:c3663326-3662952 [Marinomonas posidonica IVIA-Po-181]
MRIFKNKAFHRWAIKEGLADSALITAVDEIEKGLVDADLGGHVFKKRVALGGRGKSAGARTLLAYRFGQRAFFMYGFAKN
SRANIDADELRALRRLAKELLEYSDIELIIAIEHGAFIEVKNNG

Download         Length: 375 bp

>T25238 NC_015559:c3663326-3662952 [Marinomonas posidonica IVIA-Po-181]
ATGCGGATATTTAAAAATAAGGCATTCCATCGCTGGGCGATTAAGGAAGGTTTGGCTGATAGTGCTTTGATAACAGCCGT
TGATGAAATTGAAAAAGGCTTAGTGGACGCGGATTTAGGTGGTCATGTGTTCAAAAAACGCGTGGCACTCGGTGGTCGAG
GAAAAAGCGCTGGTGCCAGAACACTGTTAGCTTACAGATTTGGCCAAAGAGCATTCTTCATGTATGGCTTTGCTAAAAAC
AGTCGAGCAAATATTGATGCTGATGAATTGAGAGCGCTAAGAAGGTTAGCGAAAGAATTGCTTGAGTACAGTGATATTGA
GCTCATTATCGCCATTGAACACGGTGCATTTATCGAGGTAAAAAATAATGGATAA

Antitoxin


Download         Length: 102 a.a.        Molecular weight: 11202.03 Da        Isoelectric Point: 9.5768

>AT25238 WP_013797812.1 NC_015559:c3662959-3662654 [Marinomonas posidonica IVIA-Po-181]
MDKSILDMVQDTAQQLYDAGVMKETTLREFDAMCLPPVKVFTAEQIKSIRTKNRASQGVFAAYLNTSKSTVQKWEQGVKK
PNGPSLKLLNLVADKGLDVLV

Download         Length: 306 bp

>AT25238 NC_015559:c3662959-3662654 [Marinomonas posidonica IVIA-Po-181]
ATGGATAAATCAATCTTAGACATGGTGCAAGATACCGCTCAGCAGTTGTACGATGCTGGCGTGATGAAAGAGACGACTCT
GCGTGAGTTTGATGCCATGTGTTTGCCTCCAGTAAAAGTGTTCACAGCCGAGCAAATTAAAAGTATCCGTACAAAAAATC
GAGCGAGTCAGGGCGTCTTTGCTGCTTATTTGAATACTAGCAAGTCCACAGTGCAAAAGTGGGAGCAAGGCGTTAAGAAG
CCGAATGGGCCGTCATTAAAACTGTTGAATTTGGTCGCCGACAAAGGTCTGGATGTGCTTGTATAG

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References