Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) /BrnT(toxin)
Location 1597928..1598414 Replicon chromosome
Accession NZ_CP101527
Organism Alkalimarinus sediminis strain FA028

Toxin (Protein)


Gene name - Uniprot ID -
Locus tag NNL22_RS07105 Protein ID WP_251812019.1
Coordinates 1598151..1598414 (-) Length 88 a.a.

Antitoxin (Protein)


Gene name - Uniprot ID -
Locus tag NNL22_RS07100 Protein ID WP_251812020.1
Coordinates 1597928..1598161 (-) Length 78 a.a.

Genomic Context

NNL22_RS07060NNL22_RS07065NNL22_RS07070NNL22_RS07075NNL22_RS07080NNL22_RS07085NNL22_RS07090NNL22_RS07095NNL22_RS07100NNL22_RS07105NNL22_RS07110NNL22_RS07115NNL22_RS07120NNL22_RS07125NNL22_RS07130NNL22_RS07135NNL22_RS07140
Location: 1593355..1593891 (537 bp)
Type: Others
Protein ID: WP_251812028.1
Location: 1593968..1594180 (213 bp)
Type: Others
Protein ID: WP_251812027.1
Location: 1594318..1594719 (402 bp)
Type: Others
Protein ID: WP_251812026.1
Location: 1594887..1595462 (576 bp)
Type: Others
Protein ID: WP_251812025.1
Location: 1595619..1595921 (303 bp)
Type: Others
Protein ID: WP_251812024.1
Location: 1596168..1596761 (594 bp)
Type: Others
Protein ID: WP_251812023.1
Location: 1597005..1597370 (366 bp)
Type: Others
Protein ID: WP_251812022.1
Location: 1597367..1597768 (402 bp)
Type: Others
Protein ID: WP_251812021.1
Location: 1597928..1598161 (234 bp)
Type: Antitoxin
Protein ID: WP_251812020.1
Location: 1598151..1598414 (264 bp)
Type: Toxin
Protein ID: WP_251812019.1
Location: 1598572..1598949 (378 bp)
Type: Others
Protein ID: WP_251812018.1
Location: 1599077..1599562 (486 bp)
Type: Others
Protein ID: WP_251812017.1
Location: 1600350..1600682 (333 bp)
Type: Others
Protein ID: WP_251813131.1
Location: 1600796..1601398 (603 bp)
Type: Others
Protein ID: WP_267267841.1
Location: 1601424..1601759 (336 bp)
Type: Others
Protein ID: WP_251813140.1
Location: 1602404..1602553 (150 bp)
Type: Others
Protein ID: WP_251813123.1
Location: 1602528..1602878 (351 bp)
Type: Others
Protein ID: WP_251813124.1
ToxinAntitoxinOther genes
Loading, please wait
Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
NNL22_RS07060 (NNL22_07055)1593355..1593891-537WP_251812028.1N-acetyltransferase-
NNL22_RS07065 (NNL22_07060)1593968..1594180-213WP_251812027.1hypothetical protein-
NNL22_RS07070 (NNL22_07065)1594318..1594719-402WP_251812026.1GFA family protein-
NNL22_RS07075 (NNL22_07070)1594887..1595462-576WP_251812025.1YdeI/OmpD-associated family protein-
NNL22_RS07080 (NNL22_07075)1595619..1595921-303WP_251812024.1hypothetical protein-
NNL22_RS07085 (NNL22_07080)1596168..1596761-594WP_251812023.1hypothetical protein-
NNL22_RS07090 (NNL22_07085)1597005..1597370-366WP_251812022.1hypothetical protein-
NNL22_RS07095 (NNL22_07090)1597367..1597768-402WP_251812021.1hypothetical protein-
NNL22_RS07100 (NNL22_07095)1597928..1598161-234WP_251812020.1BrnA antitoxin family proteinAntitoxin
NNL22_RS07105 (NNL22_07100)1598151..1598414-264WP_251812019.1BrnT family toxinToxin
NNL22_RS07110 (NNL22_07105)1598572..1598949-378WP_251812018.1hypothetical protein-
NNL22_RS07115 (NNL22_07110)1599077..1599562-486WP_251812017.1DUF2004 domain-containing protein-
NNL22_RS07120 (NNL22_07115)1600350..1600682-333WP_251813131.1hypothetical protein-
NNL22_RS07125 (NNL22_07120)1600796..1601398-603WP_267267841.1DMP19 family protein-
NNL22_RS07130 (NNL22_07125)1601424..1601759-336WP_251813140.1type II toxin-antitoxin system HicB family antitoxin-
NNL22_RS07135 (NNL22_07130)1602404..1602553-150WP_251813123.1hypothetical protein-
NNL22_RS07140 (NNL22_07135)1602528..1602878-351WP_251813124.1hypothetical protein-

Associated MGEs

Loading, please wait
MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
-insideIntegron--1597367..161660919242


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Ribonuclease toxin, BrnT, of type II toxin-antitoxin system

(6-81)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 88 a.a.        Molecular weight: 10007.16 Da        Isoelectric Point: 6.4605

>T252205 WP_251812019.1 NZ_CP101527:c1598414-1598151 [Alkalimarinus sediminis]
MSDFEYDPQKSKSNLEKHGIDFEQAKCLWDDSNLVEISAKTTDEPRSLVIGQIGSKHWSAVITYRNSTIRIISVRRSRNT
EVSLYES

Download         Length: 264 bp

Antitoxin


Download         Length: 78 a.a.        Molecular weight: 9118.36 Da        Isoelectric Point: 6.2245

>AT252205 WP_251812020.1 NZ_CP101527:c1598161-1597928 [Alkalimarinus sediminis]
MKAKDFEEKFDANEEDLISNLDLSSVKRVNQQQKRVNVDFPVWMIESLDKEASRLGVTRQSIIKVWLAERLEHQIHH

Download         Length: 234 bp


Similar Proteins

Only experimentally validated proteins are listed.

Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

Loading, please wait
Source
ID
Structure
No matching records found

Antitoxin

Loading, please wait
Source
ID
Structure
No matching records found

References