Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/ParE-RelB
Location 2330219..2330764 Replicon chromosome
Accession NC_015460
Organism Gallibacterium anatis UMN179

Toxin (Protein)


Gene name relE Uniprot ID F4HF99
Locus tag UMN179_RS10915 Protein ID WP_013746939.1
Coordinates 2330477..2330764 (+) Length 96 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID A0A0A3A4K2
Locus tag UMN179_RS10910 Protein ID WP_039083793.1
Coordinates 2330219..2330467 (+) Length 83 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(5-87)

Antitoxin

RelB antitoxin/Antitoxin DinJ

(1-66)


Sequences

Toxin        


Download         Length: 96 a.a.        Molecular weight: 11026.94 Da        Isoelectric Point: 10.4262

>T25215 WP_013746939.1 NC_015460:2330477-2330764 [Gallibacterium anatis UMN179]
MAYAIKVHSDFVAELNKLDSTIKNQLRKKLEKVVHNPHIPKNRLSGELHNCYKIKLRKAGVRLVYQVNDDEIYILLLTVG
KREAKQVYNTALNRV

Download         Length: 288 bp

>T25215 NC_015460:2330477-2330764 [Gallibacterium anatis UMN179]
ATGGCTTATGCAATTAAGGTGCATAGTGATTTTGTGGCAGAATTGAATAAATTAGATTCTACTATAAAAAATCAGCTACG
AAAGAAATTGGAAAAAGTAGTACACAATCCACATATTCCTAAAAATAGATTAAGTGGAGAGCTTCATAATTGTTATAAAA
TTAAACTAAGAAAAGCTGGAGTGCGGTTGGTTTACCAAGTCAATGATGATGAAATTTATATCTTATTACTGACAGTTGGT
AAGCGAGAGGCTAAGCAAGTTTATAACACTGCATTAAATCGAGTTTAA

Antitoxin


Download         Length: 83 a.a.        Molecular weight: 9375.72 Da        Isoelectric Point: 4.4230

>AT25215 WP_039083793.1 NC_015460:2330219-2330467 [Gallibacterium anatis UMN179]
MANLNIRIDDTIKQRAFLAFDNLGINPSEAIRTFLTYVADTGRMPIKQIIVSDEDTELYEVVKKRLNEPEKITATTLDEL
FS

Download         Length: 249 bp

>AT25215 NC_015460:2330219-2330467 [Gallibacterium anatis UMN179]
ATGGCTAATTTAAATATTCGTATTGATGATACTATTAAACAGAGGGCATTTTTAGCTTTTGATAATTTAGGCATTAATCC
ATCGGAAGCAATCCGTACATTTTTGACCTATGTCGCAGACACAGGGAGGATGCCAATTAAACAAATTATTGTCTCGGATG
AAGACACTGAGCTTTATGAGGTAGTGAAAAAACGCTTAAATGAACCGGAGAAAATCACTGCAACTACATTGGATGAGCTT
TTCTCTTAG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB F4HF99

Antitoxin

Source ID Structure
AlphaFold DB A0A0A3A4K2

References