Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 4594281..4594647 Replicon chromosome
Accession NZ_CP101176
Organism Xanthomonas campestris pv. campestris strain CN08

Toxin (Protein)


Gene name EcnB Uniprot ID G0CKD4
Locus tag XCCCN08v2_RS20215 Protein ID WP_011270059.1
Coordinates 4594281..4594415 (-) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID Q8P3Z2
Locus tag XCCCN08v2_RS20220 Protein ID WP_011038999.1
Coordinates 4594495..4594647 (-) Length 51 a.a.

Genomic Context

XCCCN08v2_RS20230XCCCN08v2_RS20235XCCCN08v2_RS20240XCCCN08v2_RS20245XCCCN08v2_RS20250XCCCN08v2_RS20195XCCCN08v2_RS20200XCCCN08v2_RS20205XCCCN08v2_RS20210XCCCN08v2_RS20215XCCCN08v2_RS20220XCCCN08v2_RS20225
Location: 4595995..4596456 (462 bp)
Type: Others
Protein ID: WP_012439505.1
Location: 4596539..4596898 (360 bp)
Type: Others
Protein ID: WP_011039002.1
Location: 4597001..4597918 (918 bp)
Type: Others
Protein ID: WP_075286290.1
Location: 4597915..4598457 (543 bp)
Type: Others
Protein ID: WP_075286291.1
Location: 4598792..4599475 (684 bp)
Type: Others
Protein ID: WP_070693788.1
Location: 4589543..4591195 (1653 bp)
Type: Others
Protein ID: WP_162808741.1
Location: 4591360..4592305 (946 bp)
Type: Others
Protein ID: Protein_3893
Location: 4592389..4593678 (1290 bp)
Type: Others
Protein ID: WP_029217012.1
Location: 4593838..4594047 (210 bp)
Type: Others
Protein ID: WP_011038998.1
Location: 4594281..4594415 (135 bp)
Type: Toxin
Protein ID: WP_011270059.1
Location: 4594495..4594647 (153 bp)
Type: Antitoxin
Protein ID: WP_011038999.1
Location: 4594758..4595681 (924 bp)
Type: Others
Protein ID: WP_040942405.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
XCCCN08v2_RS201954589543..4591195-1653WP_162808741.1M28 family metallopeptidase-
XCCCN08v2_RS202004591360..4592305-946Protein_3893MBL fold metallo-hydrolase-
XCCCN08v2_RS202054592389..4593678-1290WP_029217012.1tryptophan--tRNA ligase-
XCCCN08v2_RS202104593838..4594047-210WP_011038998.1CsbD family protein-
XCCCN08v2_RS202154594281..4594415-135WP_011270059.1entericidin A/B family lipoproteinToxin
XCCCN08v2_RS202204594495..4594647-153WP_011038999.1entericidin A/B family lipoproteinAntitoxin
XCCCN08v2_RS202254594758..4595681-924WP_040942405.1arginase-
XCCCN08v2_RS202304595995..4596456+462WP_012439505.1roadblock/LC7 domain-containing protein-
XCCCN08v2_RS202354596539..4596898+360WP_011039002.1hypothetical protein-
XCCCN08v2_RS202404597001..4597918+918WP_075286290.1hypothetical protein-
XCCCN08v2_RS202454597915..4598457+543WP_075286291.1GTPase-
XCCCN08v2_RS202504598792..4599475+684WP_070693788.1dTMP kinase-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4431.27 Da        Isoelectric Point: 9.3487

>T251465 WP_011270059.1 NZ_CP101176:c4594415-4594281 [Xanthomonas campestris pv. campestris]
MKRAIALLVLSMLSVGMLAGCNTVAGAGKDVQGAGEKVEDAARK

Download         Length: 135 bp

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5173.15 Da        Isoelectric Point: 8.2782

>AT251465 WP_011038999.1 NZ_CP101176:c4594647-4594495 [Xanthomonas campestris pv. campestris]
MKRLLTLMVLGLFSAGMMTGCNTMAGAGKDMQGAGDKVEKTADKCSDGKC

Download         Length: 153 bp


Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
AlphaFold DBA0A0H2XDQ0

Antitoxin

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Source
ID
Structure
AlphaFold DBQ8P3Z2

References