251465

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 4594281..4594647 Replicon chromosome
Accession NZ_CP101176
Organism Xanthomonas campestris pv. campestris strain CN08

Toxin (Protein)


Gene name EcnB Uniprot ID G0CKD4
Locus tag XCCCN08v2_RS20215 Protein ID WP_011270059.1
Coordinates 4594281..4594415 (-) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID Q8P3Z2
Locus tag XCCCN08v2_RS20220 Protein ID WP_011038999.1
Coordinates 4594495..4594647 (-) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
XCCCN08v2_RS20195 4589543..4591195 - 1653 WP_162808741.1 M28 family metallopeptidase -
XCCCN08v2_RS20200 4591360..4592305 - 946 Protein_3893 MBL fold metallo-hydrolase -
XCCCN08v2_RS20205 4592389..4593678 - 1290 WP_029217012.1 tryptophan--tRNA ligase -
XCCCN08v2_RS20210 4593838..4594047 - 210 WP_011038998.1 CsbD family protein -
XCCCN08v2_RS20215 4594281..4594415 - 135 WP_011270059.1 entericidin A/B family lipoprotein Toxin
XCCCN08v2_RS20220 4594495..4594647 - 153 WP_011038999.1 entericidin A/B family lipoprotein Antitoxin
XCCCN08v2_RS20225 4594758..4595681 - 924 WP_040942405.1 arginase -
XCCCN08v2_RS20230 4595995..4596456 + 462 WP_012439505.1 roadblock/LC7 domain-containing protein -
XCCCN08v2_RS20235 4596539..4596898 + 360 WP_011039002.1 hypothetical protein -
XCCCN08v2_RS20240 4597001..4597918 + 918 WP_075286290.1 hypothetical protein -
XCCCN08v2_RS20245 4597915..4598457 + 543 WP_075286291.1 GTPase -
XCCCN08v2_RS20250 4598792..4599475 + 684 WP_070693788.1 dTMP kinase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4431.27 Da        Isoelectric Point: 9.3487

>T251465 WP_011270059.1 NZ_CP101176:c4594415-4594281 [Xanthomonas campestris pv. campestris]
MKRAIALLVLSMLSVGMLAGCNTVAGAGKDVQGAGEKVEDAARK

Download         Length: 135 bp

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5173.15 Da        Isoelectric Point: 8.2782

>AT251465 WP_011038999.1 NZ_CP101176:c4594647-4594495 [Xanthomonas campestris pv. campestris]
MKRLLTLMVLGLFSAGMMTGCNTMAGAGKDMQGAGDKVEKTADKCSDGKC

Download         Length: 153 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0H2XDQ0

Antitoxin

Source ID Structure
AlphaFold DB Q8P3Z2

References