251463

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 4730352..4730715 Replicon chromosome
Accession NZ_CP101174
Organism Xanthomonas campestris pv. campestris strain CN07

Toxin (Protein)


Gene name EcnB Uniprot ID G0CKD4
Locus tag XCCCN07v2_RS20845 Protein ID WP_011270059.1
Coordinates 4730352..4730486 (-) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID Q8P3Z2
Locus tag XCCCN07v2_RS20850 Protein ID WP_011038999.1
Coordinates 4730563..4730715 (-) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
XCCCN07v2_RS20825 4725617..4727269 - 1653 WP_043877841.1 M28 family metallopeptidase -
XCCCN07v2_RS20830 4727434..4728378 - 945 WP_043877842.1 MBL fold metallo-hydrolase -
XCCCN07v2_RS20835 4728462..4729751 - 1290 WP_029629069.1 tryptophan--tRNA ligase -
XCCCN07v2_RS20840 4729911..4730120 - 210 WP_011038998.1 CsbD family protein -
XCCCN07v2_RS20845 4730352..4730486 - 135 WP_011270059.1 entericidin A/B family lipoprotein Toxin
XCCCN07v2_RS20850 4730563..4730715 - 153 WP_011038999.1 entericidin A/B family lipoprotein Antitoxin
XCCCN07v2_RS20855 4730826..4731749 - 924 WP_011039000.1 arginase -
XCCCN07v2_RS20860 4732063..4732524 + 462 WP_011039001.1 roadblock/LC7 domain-containing protein -
XCCCN07v2_RS20865 4732607..4732966 + 360 WP_011039002.1 hypothetical protein -
XCCCN07v2_RS20870 4733069..4733986 + 918 WP_011039003.1 hypothetical protein -
XCCCN07v2_RS20875 4733983..4734525 + 543 WP_011039004.1 GTPase -
XCCCN07v2_RS20880 4734860..4735543 + 684 WP_011039005.1 dTMP kinase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4431.27 Da        Isoelectric Point: 9.3487

>T251463 WP_011270059.1 NZ_CP101174:c4730486-4730352 [Xanthomonas campestris pv. campestris]
MKRAIALLVLSMLSVGMLAGCNTVAGAGKDVQGAGEKVEDAARK

Download         Length: 135 bp

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5173.15 Da        Isoelectric Point: 8.2782

>AT251463 WP_011038999.1 NZ_CP101174:c4730715-4730563 [Xanthomonas campestris pv. campestris]
MKRLLTLMVLGLFSAGMMTGCNTMAGAGKDMQGAGDKVEKTADKCSDGKC

Download         Length: 153 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0H2XDQ0

Antitoxin

Source ID Structure
AlphaFold DB Q8P3Z2

References