Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) cptAB/-
Location 487041..487680 Replicon chromosome
Accession NZ_CP101115
Organism Acinetobacter sp. Z1

Toxin (Protein)


Gene name cptA Uniprot ID -
Locus tag NGC85_RS02340 Protein ID WP_254804709.1
Coordinates 487285..487680 (+) Length 132 a.a.

Antitoxin (Protein)


Gene name cptB Uniprot ID -
Locus tag NGC85_RS02335 Protein ID WP_034710568.1
Coordinates 487041..487298 (+) Length 86 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NGC85_RS02310 (NGC85_02310) 482067..482432 + 366 WP_004641032.1 50S ribosomal protein L17 -
NGC85_RS02315 (NGC85_02315) 482625..483122 + 498 WP_254804706.1 GNAT family N-acetyltransferase -
NGC85_RS02320 (NGC85_02320) 483524..485014 + 1491 WP_254804707.1 NAD(P)/FAD-dependent oxidoreductase -
NGC85_RS02325 (NGC85_02325) 485139..485633 + 495 WP_254804708.1 DUF2059 domain-containing protein -
NGC85_RS02330 (NGC85_02330) 485681..486853 - 1173 WP_005059702.1 acyl-CoA dehydrogenase family protein -
NGC85_RS02335 (NGC85_02335) 487041..487298 + 258 WP_034710568.1 succinate dehydrogenase assembly factor 2 Antitoxin
NGC85_RS02340 (NGC85_02340) 487285..487680 + 396 WP_254804709.1 hypothetical protein Toxin
NGC85_RS02345 (NGC85_02345) 487889..488110 + 222 WP_005059699.1 hypothetical protein -
NGC85_RS02350 (NGC85_02350) 488454..489539 + 1086 WP_005059697.1 hypothetical protein -
NGC85_RS02355 (NGC85_02355) 489613..490203 + 591 WP_005059696.1 rhombosortase -
NGC85_RS02360 (NGC85_02360) 490360..492570 + 2211 WP_254804710.1 TRAP transporter large permease subunit -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Flavinator of succinate dehydrogenase

(10-82)


Sequences

Toxin        


Download         Length: 132 a.a.        Molecular weight: 15727.80 Da        Isoelectric Point: 9.9997

>T251412 WP_254804709.1 NZ_CP101115:487285-487680 [Acinetobacter sp. Z1]
MSMASRLFELQYSRFSIVLQLFVFLTISILSYQLLHMMLWLLSLGIMAFAWFKLSKQPSIIRFEYLDQHIWSFEFSDKNL
AIQRLKITKIIDHKAYVSIHIADSSCKTYIIWWDQLSYLQWKNLKLLAKLI

Download         Length: 396 bp

Antitoxin


Download         Length: 86 a.a.        Molecular weight: 10187.59 Da        Isoelectric Point: 4.6034

>AT251412 WP_034710568.1 NZ_CP101115:487041-487298 [Acinetobacter sp. Z1]
MSDEMTLEERKVIYRARRGLKEIDVYFDPYVKNHYLTADQAEKALFAELVEQEDPDLLDWFMEVGEPPRNELKDFILKLK
HYVHG

Download         Length: 258 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References