250890

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 4803727..4804104 Replicon chromosome
Accession NZ_CP100647
Organism Xanthomonas sacchari strain DD13

Toxin (Protein)


Gene name EcnB Uniprot ID -
Locus tag NKJ47_RS20325 Protein ID WP_160966335.1
Coordinates 4803727..4803861 (-) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID A0A6N7QPX8
Locus tag NKJ47_RS20330 Protein ID WP_017908941.1
Coordinates 4803952..4804104 (-) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NKJ47_RS20300 4799415..4799582 - 168 WP_254461484.1 peptidase -
NKJ47_RS20305 4799690..4800622 - 933 WP_254459510.1 MBL fold metallo-hydrolase -
NKJ47_RS20310 4800910..4802202 - 1293 WP_254459511.1 tryptophan--tRNA ligase -
NKJ47_RS20315 4802311..4803255 + 945 WP_254459512.1 hypothetical protein -
NKJ47_RS20320 4803326..4803541 - 216 WP_254459513.1 CsbD family protein -
NKJ47_RS20325 4803727..4803861 - 135 WP_160966335.1 entericidin A/B family lipoprotein Toxin
NKJ47_RS20330 4803952..4804104 - 153 WP_017908941.1 entericidin A/B family lipoprotein Antitoxin
NKJ47_RS20335 4804249..4805172 - 924 WP_254459514.1 arginase -
NKJ47_RS20340 4805571..4806005 + 435 WP_254459515.1 hypothetical protein -
NKJ47_RS20345 4806061..4806330 + 270 WP_104562876.1 hypothetical protein -
NKJ47_RS20350 4806470..4806826 - 357 WP_254459516.1 PriCT-2 domain-containing protein -
NKJ47_RS20355 4807352..4808296 + 945 WP_254459517.1 hypothetical protein -
NKJ47_RS20360 4808298..4808795 + 498 WP_232131726.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4629.45 Da        Isoelectric Point: 9.2977

>T250890 WP_160966335.1 NZ_CP100647:c4803861-4803727 [Xanthomonas sacchari]
MKRTFAWMLLAMFSVGLLAGCNTVAGAGKDVQKAGEKVEDAAKN

Download         Length: 135 bp

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5181.14 Da        Isoelectric Point: 8.1219

>AT250890 WP_017908941.1 NZ_CP100647:c4804104-4803952 [Xanthomonas sacchari]
MKRLTTLLMLTLFCAGVLTGCNTVAGAGKDMQKAGEKVEDTAKDCSAGKC

Download         Length: 153 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure
AlphaFold DB A0A6N7QPX8

References