Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) ataRT/DUF1778(antitoxin)
Location 1105389..1106138 Replicon chromosome
Accession NZ_CP100647
Organism Xanthomonas sacchari strain DD13

Toxin (Protein)


Gene name ataT Uniprot ID -
Locus tag NKJ47_RS04500 Protein ID WP_254460336.1
Coordinates 1105701..1106138 (+) Length 146 a.a.

Antitoxin (Protein)


Gene name ataR Uniprot ID -
Locus tag NKJ47_RS04495 Protein ID WP_254460335.1
Coordinates 1105389..1105661 (+) Length 91 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NKJ47_RS04475 1101043..1101840 + 798 WP_254460331.1 hypothetical protein -
NKJ47_RS04480 1101940..1102629 + 690 WP_254460332.1 hypothetical protein -
NKJ47_RS04485 1102779..1104038 + 1260 WP_254460333.1 MFS transporter -
NKJ47_RS04490 1104042..1105025 - 984 WP_254460334.1 NAD(P)-dependent oxidoreductase -
NKJ47_RS04495 1105389..1105661 + 273 WP_254460335.1 DUF1778 domain-containing protein Antitoxin
NKJ47_RS04500 1105701..1106138 + 438 WP_254460336.1 GNAT family N-acetyltransferase Toxin
NKJ47_RS04505 1106398..1108290 + 1893 WP_254460337.1 PEP/pyruvate-binding domain-containing protein -
NKJ47_RS04510 1108403..1109383 + 981 WP_254460338.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

GNAT domain

(18-130)

Antitoxin

Vibrio phage ICP1, Orf50

(9-83)


Sequences

Toxin        


Download         Length: 146 a.a.        Molecular weight: 15779.35 Da        Isoelectric Point: 8.1629

>T250889 WP_254460336.1 NZ_CP100647:1105701-1106138 [Xanthomonas sacchari]
MLDEFACSAPELSKWLRERALQNQASNASRCFVVCDREERVVGYYALAAGAVSHEEAPGRIRRNMPKAIPVIVLGRLAVH
ADWVGQGIGTGLLKDAVQRALQVGEHIGARALLCHAIDDAAKAFYMKHGFFASPIHAMTVMLPLA

Download         Length: 438 bp

Antitoxin


Download         Length: 91 a.a.        Molecular weight: 10007.59 Da        Isoelectric Point: 10.9502

>AT250889 WP_254460335.1 NZ_CP100647:1105389-1105661 [Xanthomonas sacchari]
MSSAASKIINFRAPAAKQALIDQAAQLSGMNRTEFILEAACEKARQVLLDQTRFTLSPQGLRRFNAMLDAPLEQNAPLRR
LLATPAPWER

Download         Length: 273 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References