Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | hipBA/HipA-HipB |
Location | 2585611..2587175 | Replicon | chromosome |
Accession | NZ_CP100392 | ||
Organism | Aeromonas caviae strain FAHZZU2447 |
Toxin (Protein)
Gene name | hipA | Uniprot ID | A0A2L0TXX7 |
Locus tag | NJR02_RS11940 | Protein ID | WP_059169586.1 |
Coordinates | 2585865..2587175 (+) | Length | 437 a.a. |
Antitoxin (Protein)
Gene name | hipB | Uniprot ID | - |
Locus tag | NJR02_RS11935 | Protein ID | WP_005329233.1 |
Coordinates | 2585611..2585865 (+) | Length | 85 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
NJR02_RS11910 (NJR02_11910) | 2581186..2581764 | - | 579 | WP_021140685.1 | hypothetical protein | - |
NJR02_RS11915 (NJR02_11915) | 2582096..2582548 | - | 453 | WP_021140686.1 | DUF2384 domain-containing protein | - |
NJR02_RS11920 (NJR02_11920) | 2582803..2584110 | + | 1308 | WP_021140687.1 | Fic family protein | - |
NJR02_RS11925 (NJR02_11925) | 2584189..2584440 | + | 252 | WP_010674977.1 | plasmid stabilization protein | - |
NJR02_RS11930 (NJR02_11930) | 2584861..2585109 | - | 249 | WP_010674978.1 | hypothetical protein | - |
NJR02_RS11935 (NJR02_11935) | 2585611..2585865 | + | 255 | WP_005329233.1 | helix-turn-helix domain-containing protein | Antitoxin |
NJR02_RS11940 (NJR02_11940) | 2585865..2587175 | + | 1311 | WP_059169586.1 | type II toxin-antitoxin system HipA family toxin | Toxin |
NJR02_RS11950 (NJR02_11950) | 2588131..2590305 | + | 2175 | WP_104453007.1 | catalase/peroxidase HPI | - |
NJR02_RS11955 (NJR02_11955) | 2590406..2591170 | - | 765 | WP_104453008.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
NJR02_RS11960 (NJR02_11960) | 2591214..2591441 | - | 228 | WP_199770477.1 | HAD hydrolase family protein | - |
NJR02_RS11965 (NJR02_11965) | 2591451..2591843 | - | 393 | WP_199770478.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 437 a.a. Molecular weight: 49136.32 Da Isoelectric Point: 7.1717
>T250522 WP_059169586.1 NZ_CP100392:2585865-2587175 [Aeromonas caviae]
MASLTVYMNGYRVGTFTKATNGAHQFQYDESWVKLPGSRPISLSMPLRQQRYQGDEAYNFFDNLLPDNPEVRNRVVARYQ
ADSTQPFDLLSCIGQDSVGALQLVAQGRPVPDVKRIECKPLSDAELEQILTSYQQGIPLGMVREEDDFRISIAGAQEKTA
LLYLDNRWCLPHAATPTTHIIKLPIGKIESHSYSIDLSQSVENEYLCTLIAKALGLPVPHCFIMQVGKVKALAVERFDRR
YATDRSWIMRLPQEDFCQVLNVPSARKYESHGGPGIADIMTTLLGSATPEQDRYLFMKSQVLFWLLAATDGHAKNFSVFI
EPEGRFRLTPFYDILSMYPAFGGKGLHPRDAKLAMGLTATKGKKYAIEQIFPRHFYQTAKTIGFEQVQMEKIISELTDNL
DEVISIVRQQLPDTFPTEIADSILGGLSSRAQRLKR
MASLTVYMNGYRVGTFTKATNGAHQFQYDESWVKLPGSRPISLSMPLRQQRYQGDEAYNFFDNLLPDNPEVRNRVVARYQ
ADSTQPFDLLSCIGQDSVGALQLVAQGRPVPDVKRIECKPLSDAELEQILTSYQQGIPLGMVREEDDFRISIAGAQEKTA
LLYLDNRWCLPHAATPTTHIIKLPIGKIESHSYSIDLSQSVENEYLCTLIAKALGLPVPHCFIMQVGKVKALAVERFDRR
YATDRSWIMRLPQEDFCQVLNVPSARKYESHGGPGIADIMTTLLGSATPEQDRYLFMKSQVLFWLLAATDGHAKNFSVFI
EPEGRFRLTPFYDILSMYPAFGGKGLHPRDAKLAMGLTATKGKKYAIEQIFPRHFYQTAKTIGFEQVQMEKIISELTDNL
DEVISIVRQQLPDTFPTEIADSILGGLSSRAQRLKR
Download Length: 1311 bp
Antitoxin
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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