Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | relBE/YafQ-RelB |
Location | 1350297..1350842 | Replicon | chromosome |
Accession | NZ_CP100390 | ||
Organism | Alkalimarinus sp. A2M4 |
Toxin (Protein)
Gene name | relE | Uniprot ID | - |
Locus tag | NKI27_RS06100 | Protein ID | WP_265049474.1 |
Coordinates | 1350297..1350506 (-) | Length | 70 a.a. |
Antitoxin (Protein)
Gene name | relB | Uniprot ID | - |
Locus tag | NKI27_RS06105 | Protein ID | WP_265048796.1 |
Coordinates | 1350570..1350842 (-) | Length | 91 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
NKI27_RS06055 (NKI27_06055) | 1345437..1345724 | + | 288 | WP_265048787.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
NKI27_RS06060 (NKI27_06060) | 1345966..1346490 | + | 525 | WP_265048788.1 | HNH endonuclease | - |
NKI27_RS06065 (NKI27_06065) | 1346612..1347160 | + | 549 | WP_265048789.1 | hypothetical protein | - |
NKI27_RS06070 (NKI27_06070) | 1347406..1347660 | + | 255 | WP_265048790.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
NKI27_RS06075 (NKI27_06075) | 1347653..1347916 | + | 264 | WP_265048791.1 | Txe/YoeB family addiction module toxin | - |
NKI27_RS06080 (NKI27_06080) | 1347980..1348645 | + | 666 | WP_265048792.1 | hypothetical protein | - |
NKI27_RS06085 (NKI27_06085) | 1348714..1349589 | + | 876 | WP_265048793.1 | class A beta-lactamase | - |
NKI27_RS06090 (NKI27_06090) | 1349655..1349957 | - | 303 | WP_265048794.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
NKI27_RS06095 (NKI27_06095) | 1349957..1350196 | - | 240 | WP_265048795.1 | type II toxin-antitoxin system ParD family antitoxin | - |
NKI27_RS06100 (NKI27_06100) | 1350297..1350506 | - | 210 | WP_265049474.1 | type II toxin-antitoxin system YafQ family toxin | Toxin |
NKI27_RS06105 (NKI27_06105) | 1350570..1350842 | - | 273 | WP_265048796.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin |
NKI27_RS06110 (NKI27_06110) | 1351081..1351362 | - | 282 | WP_265048797.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
NKI27_RS06115 (NKI27_06115) | 1351610..1351927 | + | 318 | WP_265048798.1 | hypothetical protein | - |
NKI27_RS06120 (NKI27_06120) | 1352207..1352995 | + | 789 | WP_265048799.1 | transporter substrate-binding domain-containing protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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