Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) slvAT/RES(toxin)
Location 5410..6356 Replicon plasmid pw30rs2p
Accession NZ_CP100206
Organism Burkholderia glumae strain PW30RS

Toxin (Protein)


Gene name slvT Uniprot ID C5AN91
Locus tag NIW90_RS31525 Protein ID WP_012732709.1
Coordinates 5823..6356 (+) Length 178 a.a.

Antitoxin (Protein)


Gene name slvA Uniprot ID C5AN90
Locus tag NIW90_RS31520 Protein ID WP_012732708.1
Coordinates 5410..5826 (+) Length 139 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NIW90_RS31500 1342..2421 + 1080 WP_012732706.1 ParB N-terminal domain-containing protein -
NIW90_RS31505 2758..4089 + 1332 WP_012732707.1 hypothetical protein -
NIW90_RS31510 4211..4537 + 327 WP_127913985.1 hypothetical protein -
NIW90_RS31515 5077..5262 + 186 WP_017432454.1 hypothetical protein -
NIW90_RS31520 5410..5826 + 417 WP_012732708.1 DUF2384 domain-containing protein Antitoxin
NIW90_RS31525 5823..6356 + 534 WP_012732709.1 RES family NAD+ phosphorylase Toxin
NIW90_RS31530 6526..6714 + 189 WP_017432455.1 hypothetical protein -
NIW90_RS31535 7466..7750 + 285 WP_017432347.1 hypothetical protein -
NIW90_RS31540 7764..8006 + 243 WP_124837682.1 hypothetical protein -
NIW90_RS31545 8003..8248 + 246 WP_127913916.1 hypothetical protein -
NIW90_RS31550 8305..8646 + 342 WP_012732710.1 hypothetical protein -
NIW90_RS31555 8649..10484 + 1836 WP_012732711.1 site-specific integrase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Non-Mobilizable plasmid - - 1..141000 141000


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

RES domain

(11-168)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 178 a.a.        Molecular weight: 19101.61 Da        Isoelectric Point: 4.7118

>T250321 WP_012732709.1 NZ_CP100206:5823-6356 [Burkholderia glumae]
MILTPLQDITAYRMHVPKWAVAPTSGAGAAKAGGRANRIGTPALYLALEAATAVAEYQQLSPLLPPGTLVSYRVTATPVV
DFTGGYRVDLWPPLWESFFCDWRHDWFNARIEPPSWVLGDEAIASGAKGILFRSTQAAGGTNLVLFVDQLGEGDRVDVHD
PAGALPRDQASWVDSPE

Download         Length: 534 bp

Antitoxin


Download         Length: 139 a.a.        Molecular weight: 14709.55 Da        Isoelectric Point: 6.4664

>AT250321 WP_012732708.1 NZ_CP100206:5410-5826 [Burkholderia glumae]
MSTLAAARAPAGGPALANFDAFLSALREPDTAAPVLSARRYVAALNIDLQTLADQAHVHRNTVARAPQSASVQQFLREAI
RVIRAATDLSGDVQRALFWYRNEPLAVFDYQTAETLVSAGRADDVVRYVASLEAGAAG

Download         Length: 417 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A2J9GLU3

Antitoxin

Source ID Structure
AlphaFold DB A0A2J9GLX3

References