Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | relBE/RelE(toxin) |
Location | 3374906..3375359 | Replicon | chromosome |
Accession | NZ_CP099608 | ||
Organism | Pseudomonas moraviensis strain OTU5BARRA1 |
Toxin (Protein)
Gene name | relE | Uniprot ID | - |
Locus tag | NF672_RS14740 | Protein ID | WP_252874547.1 |
Coordinates | 3375138..3375359 (+) | Length | 74 a.a. |
Antitoxin (Protein)
Gene name | relB | Uniprot ID | A0A2U1RCR7 |
Locus tag | NF672_RS14735 | Protein ID | WP_042606822.1 |
Coordinates | 3374906..3375100 (+) | Length | 65 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
NF672_RS14705 (NF672_14705) | 3370137..3370964 | + | 828 | WP_042606825.1 | ABC transporter permease | - |
NF672_RS14710 (NF672_14710) | 3370961..3371728 | + | 768 | WP_064362793.1 | phosphonate ABC transporter, permease protein PhnE | - |
NF672_RS14715 (NF672_14715) | 3371907..3373586 | + | 1680 | WP_252872919.1 | MFS transporter | - |
NF672_RS14720 (NF672_14720) | 3373695..3373913 | + | 219 | WP_042606898.1 | hypothetical protein | - |
NF672_RS14725 (NF672_14725) | 3374145..3374339 | + | 195 | WP_252872920.1 | stability determinant | - |
NF672_RS14730 (NF672_14730) | 3374302..3374613 | + | 312 | WP_252872921.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
NF672_RS14735 (NF672_14735) | 3374906..3375100 | + | 195 | WP_042606822.1 | hypothetical protein | Antitoxin |
NF672_RS14740 (NF672_14740) | 3375138..3375359 | + | 222 | WP_252874547.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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