Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | TsaAT/- |
Location | 888377..888854 | Replicon | chromosome |
Accession | NZ_CP099576 | ||
Organism | Staphylococcus aureus strain MRSA1369 |
Toxin (Protein)
Gene name | TsaT | Uniprot ID | Q2G005 |
Locus tag | NHB12_RS04280 | Protein ID | WP_000052078.1 |
Coordinates | 888377..888565 (-) | Length | 63 a.a. |
Antitoxin (Protein)
Gene name | TsaA | Uniprot ID | T1Y6P8 |
Locus tag | NHB12_RS04285 | Protein ID | WP_001059690.1 |
Coordinates | 888594..888854 (-) | Length | 87 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
NHB12_RS04250 (884418) | 884418..884888 | + | 471 | WP_000824472.1 | hypothetical protein | - |
NHB12_RS04255 (885229) | 885229..885915 | + | 687 | WP_001548082.1 | thermonuclease family protein | - |
NHB12_RS04260 (886272) | 886272..886472 | + | 201 | WP_001059082.1 | cold-shock protein | - |
NHB12_RS04265 (886968) | 886968..887186 | - | 219 | WP_000005886.1 | hypothetical protein | - |
NHB12_RS04270 (887248) | 887248..887532 | - | 285 | WP_001004395.1 | hypothetical protein | - |
NHB12_RS04275 (887620) | 887620..888189 | - | 570 | WP_001106654.1 | lipoprotein N-acylation protein LnsA | - |
NHB12_RS04280 (888377) | 888377..888565 | - | 189 | WP_000052078.1 | hypothetical protein | Toxin |
NHB12_RS04285 (888594) | 888594..888854 | - | 261 | WP_001059690.1 | hypothetical protein | Antitoxin |
NHB12_RS04290 (889195) | 889195..889398 | + | 204 | WP_000145163.1 | sterile alpha motif-like domain-containing protein | - |
NHB12_RS04295 (889395) | 889395..889631 | - | 237 | WP_000368687.1 | hypothetical protein | - |
NHB12_RS04300 (889856) | 889856..890437 | + | 582 | WP_001140686.1 | histidine phosphatase family protein | - |
NHB12_RS04305 (890510) | 890510..891127 | - | 618 | WP_000255561.1 | LysE/ArgO family amino acid transporter | - |
NHB12_RS04310 (891282) | 891282..891776 | - | 495 | WP_000569884.1 | GNAT family N-acetyltransferase | - |
NHB12_RS04315 (892175) | 892175..892597 | - | 423 | WP_000974460.1 | organic hydroperoxide resistance protein | - |
NHB12_RS04320 (892745) | 892745..893461 | + | 717 | WP_000150017.1 | type I 3-dehydroquinate dehydratase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Prophage | - | selk / selq | 883061..914143 | 31082 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Structures
Toxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A0D6HZ40 |
Antitoxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A0E0VN56 |