248917

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) /BrnT(toxin)
Location 1920178..1920664 Replicon chromosome
Accession NZ_CP099464
Organism Dolichospermum heterosporum TAC447 strain NIES-1697

Toxin (Protein)


Gene name - Uniprot ID -
Locus tag NG743_RS08755 Protein ID WP_027403973.1
Coordinates 1920401..1920664 (-) Length 88 a.a.

Antitoxin (Protein)


Gene name - Uniprot ID -
Locus tag NG743_RS08750 Protein ID WP_027403974.1
Coordinates 1920178..1920411 (-) Length 78 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NG743_RS08715 (NG743_08680) 1915496..1916014 - 519 WP_027400593.1 DUF29 family protein -
NG743_RS08720 (NG743_08685) 1916068..1916301 - 234 WP_096664968.1 CopG family antitoxin -
NG743_RS08725 (NG743_08690) 1916412..1916741 - 330 WP_193964480.1 helix-turn-helix transcriptional regulator -
NG743_RS08730 (NG743_08695) 1916752..1917111 - 360 WP_193964482.1 type II toxin-antitoxin system RelE/ParE family toxin -
NG743_RS08735 (NG743_08700) 1917119..1918948 - 1830 WP_051424193.1 WG repeat-containing protein -
NG743_RS08740 (NG743_08705) 1919347..1919622 + 276 WP_027403976.1 type II toxin-antitoxin system HicA family toxin -
NG743_RS08745 (NG743_08710) 1919588..1919968 + 381 WP_027403975.1 toxin-antitoxin system HicB family antitoxin -
NG743_RS08750 (NG743_08715) 1920178..1920411 - 234 WP_027403974.1 CopG family antitoxin Antitoxin
NG743_RS08755 (NG743_08720) 1920401..1920664 - 264 WP_027403973.1 BrnT family toxin Toxin
NG743_RS08760 (NG743_08725) 1920768..1923710 - 2943 WP_257121853.1 serine/threonine-protein kinase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Ribonuclease toxin, BrnT, of type II toxin-antitoxin system

(6-81)

Antitoxin

CopG antitoxin

(3-69)


Sequences

Toxin        


Download         Length: 88 a.a.        Molecular weight: 10224.56 Da        Isoelectric Point: 7.3186

>T248917 WP_027403973.1 NZ_CP099464:c1920664-1920401 [Dolichospermum heterosporum TAC447]
MMEFEFDANKSATNKTKHNIDFIEAQKLWRDTHLVEVPANTTDEPRFLVIGKIADKHWSAVITYRSDKIRIISVRRSRTE
EANIYES

Download         Length: 264 bp

Antitoxin


Download         Length: 78 a.a.        Molecular weight: 9058.34 Da        Isoelectric Point: 4.8308

>AT248917 WP_027403974.1 NZ_CP099464:c1920411-1920178 [Dolichospermum heterosporum TAC447]
MKAEEFDTKFDNGEDITELLDLSQVHHPRYTQKRVNIDFPVWMIEALEQEAKRLGVTSDSIIKLWLAERLDKKVITN

Download         Length: 234 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References