Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) tad-ata/Tad-HTH_37
Location 2369802..2370483 Replicon chromosome
Accession NC_014394
Organism Gallionella capsiferriformans ES-2

Toxin (Protein)


Gene name tad Uniprot ID D9SIN3
Locus tag GALF_RS10915 Protein ID WP_013294120.1
Coordinates 2370115..2370483 (-) Length 123 a.a.

Antitoxin (Protein)


Gene name ata Uniprot ID -
Locus tag GALF_RS10910 Protein ID WP_013294119.1
Coordinates 2369802..2370122 (-) Length 107 a.a.

Genomic Context

GALF_RS10935GALF_RS10940GALF_RS15755GALF_RS10890GALF_RS10895GALF_RS15595GALF_RS10900GALF_RS10905GALF_RS10910GALF_RS10915GALF_RS10920GALF_RS10925GALF_RS10930
Location: 2372740..2373864 (1125 bp)
Type: Others
Protein ID: WP_013294125.1
Location: 2373875..2374366 (492 bp)
Type: Others
Protein ID: WP_013294126.1
Location: 2374493..2374642 (150 bp)
Type: Others
Protein ID: WP_190274076.1
Location: 2365462..2366670 (1209 bp)
Type: Others
Protein ID: WP_013294114.1
Location: 2366702..2367961 (1260 bp)
Type: Others
Protein ID: WP_013294115.1
Location: 2368096..2368413 (318 bp)
Type: Others
Protein ID: WP_190274075.1
Location: 2369019..2369330 (312 bp)
Type: Others
Protein ID: WP_013294117.1
Location: 2369371..2369604 (234 bp)
Type: Others
Protein ID: WP_013294118.1
Location: 2369802..2370122 (321 bp)
Type: Antitoxin
Protein ID: WP_013294119.1
Location: 2370115..2370483 (369 bp)
Type: Toxin
Protein ID: WP_013294120.1
Location: 2370696..2371268 (573 bp)
Type: Others
Protein ID: WP_013294122.1
Location: 2371332..2371523 (192 bp)
Type: Others
Protein ID: WP_013294123.1
Location: 2372076..2372570 (495 bp)
Type: Others
Protein ID: WP_013294124.1
ToxinAntitoxinOther genes
Loading, please wait
Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
GALF_RS108902365462..2366670-1209WP_013294114.1efflux RND transporter periplasmic adaptor subunit-
GALF_RS108952366702..2367961-1260WP_013294115.1TolC family protein-
GALF_RS155952368096..2368413-318WP_190274075.1hypothetical protein-
GALF_RS109002369019..2369330-312WP_013294117.1hypothetical protein-
GALF_RS109052369371..2369604-234WP_013294118.1DUF2798 domain-containing protein-
GALF_RS109102369802..2370122-321WP_013294119.1helix-turn-helix domain-containing proteinAntitoxin
GALF_RS109152370115..2370483-369WP_013294120.1type II toxin-antitoxin system RelE/ParE family toxinToxin
GALF_RS109202370696..2371268-573WP_013294122.1DUF3365 domain-containing protein-
GALF_RS109252371332..2371523-192WP_013294123.1DUF2892 domain-containing protein-
GALF_RS109302372076..2372570-495WP_013294124.1peptidylprolyl isomerase-
GALF_RS109352372740..2373864+1125WP_013294125.1cupin domain-containing protein-
GALF_RS109402373875..2374366+492WP_013294126.1hypothetical protein-
GALF_RS157552374493..2374642+150WP_190274076.1hypothetical protein-

Associated MGEs

Loading, please wait
MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin HigB-like

(17-110)

Antitoxin

HigA2-like, helix-turn-helix domain

(11-90)


Sequences

Toxin        


Download         Length: 123 a.a.        Molecular weight: 13524.55 Da        Isoelectric Point: 9.4546

>T24876 WP_013294120.1 NC_014394:c2370483-2370115 [Gallionella capsiferriformans ES-2]
MNKVTVKPLEWVASSKKDLMSMPSDVVDVFGFALHVAQHGGKHLQAKPLKGFGSAGVLEVVEDDDGNTYRAVYTVRFGHA
VYVLHCFQKKSHKGIATPKQDIDLIRDRLKLAQQHAEGVKNE

Download         Length: 369 bp

>T24876 NC_014394:c2370483-2370115 [Gallionella capsiferriformans ES-2]
ATGAATAAAGTCACGGTTAAGCCGCTAGAGTGGGTCGCATCCTCAAAAAAGGATTTGATGTCCATGCCGTCCGATGTCGT
GGATGTATTCGGGTTTGCGCTTCATGTGGCGCAGCATGGCGGGAAGCATTTACAAGCAAAACCATTGAAGGGTTTTGGAT
CGGCGGGTGTTCTTGAAGTTGTTGAAGATGATGACGGCAATACCTATCGAGCCGTCTACACAGTCCGGTTTGGTCATGCT
GTGTACGTGCTCCATTGTTTTCAAAAGAAATCCCATAAGGGTATCGCGACGCCCAAACAGGATATCGATCTGATTCGTGA
TAGGTTGAAATTGGCGCAGCAGCATGCGGAAGGAGTAAAAAATGAGTGA

Antitoxin


Download         Length: 107 a.a.        Molecular weight: 11589.40 Da        Isoelectric Point: 9.1183

>AT24876 WP_013294119.1 NC_014394:c2370122-2369802 [Gallionella capsiferriformans ES-2]
MSDIESGSNNVYADLGVPDAEEMWVKAQLATNIGEIIKRRKLTQVQAAELLGITQPKLSGLLRGQFRGISEAKLLECLTR
LGRDIQIVVKSAPRSRTEGHVSVVFA

Download         Length: 321 bp

>AT24876 NC_014394:c2370122-2369802 [Gallionella capsiferriformans ES-2]
ATGAGTGATATTGAGTCTGGTAGCAACAATGTGTATGCCGACCTCGGGGTGCCTGATGCCGAAGAAATGTGGGTTAAAGC
CCAATTGGCCACTAATATTGGCGAGATCATTAAACGACGCAAATTAACGCAAGTTCAAGCCGCCGAATTGCTGGGTATCA
CGCAACCTAAACTGTCAGGTTTGTTGCGCGGTCAGTTTCGCGGTATTTCTGAAGCTAAGCTGTTGGAATGTCTCACGCGA
TTGGGGCGGGATATTCAGATTGTGGTTAAGTCTGCTCCGCGATCACGCACAGAAGGTCATGTGTCTGTTGTATTTGCATA
G

Similar Proteins

Only experimentally validated proteins are listed.

Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

Loading, please wait
Source
ID
Structure
AlphaFold DBD9SIN3

Antitoxin

Loading, please wait
Source
ID
Structure
No matching records found

References