Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | relBE/ParE-RelB |
Location | 598924..599440 | Replicon | chromosome |
Accession | NZ_CP099084 | ||
Organism | Citrobacter freundii strain RHB43-C17 |
Toxin (Protein)
Gene name | relE | Uniprot ID | - |
Locus tag | NFK79_RS02955 | Protein ID | WP_096758513.1 |
Coordinates | 599156..599440 (+) | Length | 95 a.a. |
Antitoxin (Protein)
Gene name | relB | Uniprot ID | - |
Locus tag | NFK79_RS02950 | Protein ID | WP_096758514.1 |
Coordinates | 598924..599166 (+) | Length | 81 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
NFK79_RS02930 (593939) | 593939..595072 | + | 1134 | WP_181498907.1 | amidohydrolase/deacetylase family metallohydrolase | - |
NFK79_RS02935 (595056) | 595056..596174 | + | 1119 | WP_181498908.1 | DgaE family pyridoxal phosphate-dependent ammonia lyase | - |
NFK79_RS02940 (596171) | 596171..596911 | + | 741 | WP_096758516.1 | KDGP aldolase family protein | - |
NFK79_RS02945 (596933) | 596933..598846 | + | 1914 | WP_181498909.1 | BglG family transcription antiterminator | - |
NFK79_RS02950 (598924) | 598924..599166 | + | 243 | WP_096758514.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin |
NFK79_RS02955 (599156) | 599156..599440 | + | 285 | WP_096758513.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
NFK79_RS02960 (599444) | 599444..599908 | - | 465 | WP_181498910.1 | anaerobic ribonucleoside-triphosphate reductase-activating protein | - |
NFK79_RS02965 (599909) | 599909..600223 | - | 315 | WP_181498911.1 | hypothetical protein | - |
NFK79_RS02970 (600339) | 600339..602477 | - | 2139 | WP_096758512.1 | anaerobic ribonucleoside-triphosphate reductase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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