247124

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mazEF/PRK09907-MazE
Location 1192401..1192984 Replicon chromosome
Accession NZ_CP098214
Organism Escherichia coli strain Z0117EC0036

Toxin (Protein)


Gene name mazF Uniprot ID V0SV58
Locus tag NBY15_RS05920 Protein ID WP_000254750.1
Coordinates 1192649..1192984 (+) Length 112 a.a.

Antitoxin (Protein)


Gene name mazE Uniprot ID S1P3W5
Locus tag NBY15_RS05915 Protein ID WP_000581937.1
Coordinates 1192401..1192649 (+) Length 83 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NBY15_RS05905 (1188740) 1188740..1190041 + 1302 WP_000046817.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
NBY15_RS05910 (1190089) 1190089..1192323 + 2235 WP_000226815.1 GTP pyrophosphokinase -
NBY15_RS05915 (1192401) 1192401..1192649 + 249 WP_000581937.1 type II toxin-antitoxin system antitoxin MazE Antitoxin
NBY15_RS05920 (1192649) 1192649..1192984 + 336 WP_000254750.1 endoribonuclease MazF Toxin
NBY15_RS05925 (1193056) 1193056..1193847 + 792 WP_001071677.1 nucleoside triphosphate pyrophosphohydrolase -
NBY15_RS05930 (1194075) 1194075..1195712 + 1638 WP_000210888.1 CTP synthase (glutamine hydrolyzing) -
NBY15_RS05935 (1195800) 1195800..1197098 + 1299 WP_000036723.1 phosphopyruvate hydratase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase PemK-like

(10-109)

Antitoxin

SpoVT-AbrB domain

(7-51)


Sequences

Toxin        


Download         Length: 112 a.a.        Molecular weight: 12067.95 Da        Isoelectric Point: 8.2618

>T247124 WP_000254750.1 NZ_CP098214:1192649-1192984 [Escherichia coli]
MVSRYVPDTGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKS
IAWRARGATKKGTVAPEELQLIKAKINVLIG

Download         Length: 336 bp

Antitoxin


Download         Length: 83 a.a.        Molecular weight: 9355.74 Da        Isoelectric Point: 4.4665

>AT247124 WP_000581937.1 NZ_CP098214:1192401-1192649 [Escherichia coli]
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKE
VW

Download         Length: 249 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB V0SV58

Antitoxin

Source ID Structure
AlphaFold DB A0A7U9LMB4

References