247099

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mazEF/PRK09907-MazE
Location 1080090..1080673 Replicon chromosome
Accession NZ_CP098211
Organism Escherichia coli strain Z0117EC0040

Toxin (Protein)


Gene name mazF Uniprot ID U9XFN8
Locus tag NBY16_RS05185 Protein ID WP_000254745.1
Coordinates 1080338..1080673 (+) Length 112 a.a.

Antitoxin (Protein)


Gene name mazE Uniprot ID S1P3W5
Locus tag NBY16_RS05180 Protein ID WP_000581937.1
Coordinates 1080090..1080338 (+) Length 83 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NBY16_RS05170 (1076429) 1076429..1077730 + 1302 WP_021542211.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
NBY16_RS05175 (1077778) 1077778..1080012 + 2235 WP_000226815.1 GTP pyrophosphokinase -
NBY16_RS05180 (1080090) 1080090..1080338 + 249 WP_000581937.1 type II toxin-antitoxin system antitoxin MazE Antitoxin
NBY16_RS05185 (1080338) 1080338..1080673 + 336 WP_000254745.1 endoribonuclease MazF Toxin
NBY16_RS05190 (1080744) 1080744..1081535 + 792 WP_001071648.1 nucleoside triphosphate pyrophosphohydrolase -
NBY16_RS05195 (1081763) 1081763..1083400 + 1638 WP_000210878.1 CTP synthase (glutamine hydrolyzing) -
NBY16_RS05200 (1083488) 1083488..1084786 + 1299 WP_000036723.1 phosphopyruvate hydratase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase PemK-like

(10-109)

Antitoxin

SpoVT-AbrB domain

(7-51)


Sequences

Toxin        


Download         Length: 112 a.a.        Molecular weight: 12158.08 Da        Isoelectric Point: 8.4777

>T247099 WP_000254745.1 NZ_CP098211:1080338-1080673 [Escherichia coli]
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPYTTQSKGYPFEVVLSGQERDGVALADQVKS
IAWRARGATKKGTVAPEELQLIKAKINVLIG

Download         Length: 336 bp

Antitoxin


Download         Length: 83 a.a.        Molecular weight: 9355.74 Da        Isoelectric Point: 4.4665

>AT247099 WP_000581937.1 NZ_CP098211:1080090-1080338 [Escherichia coli]
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKE
VW

Download         Length: 249 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0E0XYM3

Antitoxin

Source ID Structure
AlphaFold DB A0A7U9LMB4

References