246253

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 1878446..1878796 Replicon chromosome
Accession NZ_CP097804
Organism Xanthomonas oryzae pv. oryzae strain FY517

Toxin (Protein)


Gene name EcnB Uniprot ID G7TLC7
Locus tag M9500_RS08995 Protein ID WP_011257368.1
Coordinates 1878446..1878580 (-) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID G7TLC8
Locus tag M9500_RS09000 Protein ID WP_011407410.1
Coordinates 1878644..1878796 (-) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
M9500_RS08980 (M9500_08980) 1875463..1876407 - 945 WP_113195610.1 MBL fold metallo-hydrolase -
M9500_RS08985 (M9500_08985) 1876538..1877827 - 1290 WP_069959696.1 tryptophan--tRNA ligase -
M9500_RS08990 (M9500_08990) 1877996..1878205 - 210 WP_011407411.1 CsbD family protein -
M9500_RS08995 (M9500_08995) 1878446..1878580 - 135 WP_011257368.1 entericidin A/B family lipoprotein Toxin
M9500_RS09000 (M9500_09000) 1878644..1878796 - 153 WP_011407410.1 entericidin A/B family lipoprotein Antitoxin
M9500_RS09005 (M9500_09005) 1878904..1879827 - 924 WP_011407409.1 arginase -
M9500_RS09010 (M9500_09010) 1880149..1880367 + 219 Protein_1715 hypothetical protein -
M9500_RS09015 (M9500_09015) 1880359..1880814 + 456 Protein_1716 hypothetical protein -
M9500_RS09020 (M9500_09020) 1880811..1881353 + 543 Protein_1717 GTPase -
M9500_RS09025 (M9500_09025) 1881833..1882516 + 684 WP_011257363.1 dTMP kinase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4457.33 Da        Isoelectric Point: 10.2040

>T246253 WP_011257368.1 NZ_CP097804:c1878580-1878446 [Xanthomonas oryzae pv. oryzae]
MKRAIVLLVLSMLSVGLLSGCNTVAGAGKDVKGAGEKVEDAARK

Download         Length: 135 bp

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5046.99 Da        Isoelectric Point: 8.7942

>AT246253 WP_011407410.1 NZ_CP097804:c1878796-1878644 [Xanthomonas oryzae pv. oryzae]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDLQGAGGKVEKTAEKCSDGKC

Download         Length: 153 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0C5UG40

Antitoxin

Source ID Structure
AlphaFold DB A0A0C5V759

References