Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) vapBC/PIN(toxin)
Location 889620..890029 Replicon chromosome
Accession NZ_CP097576
Organism Microcystis aeruginosa str. Chao 1910

Toxin (Protein)


Gene name vapC Uniprot ID -
Locus tag M8120_RS04360 Protein ID WP_198285282.1
Coordinates 889823..890029 (+) Length 69 a.a.

Antitoxin (Protein)


Gene name vapB Uniprot ID -
Locus tag M8120_RS04355 Protein ID WP_242030205.1
Coordinates 889620..889823 (+) Length 68 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
M8120_RS04330 (M8120_04295) 885713..886195 - 483 WP_235614858.1 IS630 family transposase -
M8120_RS04335 (M8120_04300) 886144..886584 - 441 WP_265795671.1 IS630 transposase-related protein -
M8120_RS04340 (M8120_04305) 886975..887688 + 714 WP_190359240.1 response regulator transcription factor -
M8120_RS04345 (M8120_04310) 887741..888742 - 1002 WP_190359238.1 phosphoribulokinase -
M8120_RS04350 (M8120_04315) 889260..889475 + 216 WP_002801839.1 hypothetical protein -
M8120_RS04355 (M8120_04320) 889620..889823 + 204 WP_242030205.1 DUF2281 domain-containing protein Antitoxin
M8120_RS04360 (M8120_04325) 889823..890029 + 207 WP_198285282.1 hypothetical protein Toxin
M8120_RS04365 (M8120_04330) 890011..892107 - 2097 WP_190359236.1 phosphate acetyltransferase -
M8120_RS04370 (M8120_04335) 892161..892499 - 339 WP_190359242.1 hypothetical protein -
M8120_RS04375 (M8120_04340) 892717..894513 - 1797 WP_190359235.1 N-acetylmuramoyl-L-alanine amidase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Domain of unknown function DUF2281

(1-66)


Sequences

Toxin        


Download         Length: 69 a.a.        Molecular weight: 7764.93 Da        Isoelectric Point: 4.2493

>T245618 WP_198285282.1 NZ_CP097576:889823-890029 [Microcystis aeruginosa str. Chao 1910]
MRSALIDTHVFIWLAEDDPILPVSLRDSLENTDNVFVSIASFWEISIKVKIGKLSLCSEITITQKDWD

Download         Length: 207 bp

Antitoxin


Download         Length: 68 a.a.        Molecular weight: 7546.53 Da        Isoelectric Point: 4.5388

>AT245618 WP_242030205.1 NZ_CP097576:889620-889823 [Microcystis aeruginosa str. Chao 1910]
MPDALKTELLHYAEYLLTKSDQTEEDKPAAKESVTVKRTLAGSIKGTFVLPLANDFDAPLEDFKDYR

Download         Length: 204 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References