245512

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) TsdAT/-
Location 856944..857453 Replicon chromosome
Accession NZ_CP097514
Organism Staphylococcus epidermidis strain C034

Toxin (Protein)


Gene name TsdT Uniprot ID Q5HMD5
Locus tag M8Z30_RS03955 Protein ID WP_001829980.1
Coordinates 857244..857453 (+) Length 70 a.a.

Antitoxin (Protein)


Gene name TsdA Uniprot ID Q5HMD4
Locus tag M8Z30_RS03950 Protein ID WP_001829893.1
Coordinates 856944..857237 (+) Length 98 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
M8Z30_RS03925 (M8Z30_03925) 851952..852740 + 789 WP_001829971.1 hydroxyethylthiazole kinase -
M8Z30_RS03930 (M8Z30_03930) 852746..853384 + 639 WP_002505076.1 thiamine phosphate synthase -
M8Z30_RS03935 (M8Z30_03935) 853473..854345 + 873 WP_002458703.1 membrane protein insertase YidC -
M8Z30_RS03940 (M8Z30_03940) 854451..855104 - 654 WP_001829983.1 HD domain-containing protein -
M8Z30_RS03945 (M8Z30_03945) 855286..856770 - 1485 WP_250067763.1 cardiolipin synthase -
M8Z30_RS03950 (M8Z30_03950) 856944..857237 + 294 WP_001829893.1 copper-sensing transcriptional repressor CsoR Antitoxin
M8Z30_RS03955 (M8Z30_03955) 857244..857453 + 210 WP_001829980.1 heavy-metal-associated domain-containing protein Toxin
M8Z30_RS03960 (M8Z30_03960) 857596..857733 + 138 WP_001829949.1 Lmo0850 family protein -
M8Z30_RS03965 (M8Z30_03965) 857833..859044 - 1212 WP_001829910.1 FtsW/RodA/SpoVE family cell cycle protein -
M8Z30_RS03970 (M8Z30_03970) 859435..860508 + 1074 WP_001832735.1 D-alanine--D-alanine ligase -
M8Z30_RS03975 (M8Z30_03975) 860520..861875 + 1356 WP_001832734.1 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Metal-sensitive transcriptional repressor

(4-95)


Sequences

Toxin        


Download         Length: 70 a.a.        Molecular weight: 7987.24 Da        Isoelectric Point: 7.0080

>T245512 WP_001829980.1 NZ_CP097514:857244-857453 [Staphylococcus epidermidis]
MKLKKGLINVSGIKTTEQAKQLKDHLSKMIGINSVDIDYQMNEIRVEFDTPANLNNIEKEIYDYGFRIL

Download         Length: 210 bp

Antitoxin


Download         Length: 98 a.a.        Molecular weight: 11070.65 Da        Isoelectric Point: 5.5778

>AT245512 WP_001829893.1 NZ_CP097514:856944-857237 [Staphylococcus epidermidis]
MADMESAHHSEQIKTNLKSRLNRIEGQVRAINRMIDDDVYCDDVLTQIRATRSALNSVATKLLDHHMKGCIMEKINDGAQ
EEAMDELLVTFQKLIKD

Download         Length: 294 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A2G7HWU1

Antitoxin

Source ID Structure
AlphaFold DB A0A0N1EPA7

References