Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/ParE-RelB
Location 4805097..4805613 Replicon chromosome
Accession NZ_CP097415
Organism Klebsiella pneumoniae strain K163

Toxin (Protein)


Gene name relE Uniprot ID R4YAY3
Locus tag M8Y70_RS23410 Protein ID WP_004178374.1
Coordinates 4805097..4805381 (-) Length 95 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID A0A919M0P8
Locus tag M8Y70_RS23415 Protein ID WP_032434351.1
Coordinates 4805371..4805613 (-) Length 81 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
M8Y70_RS23385 (4800580) 4800580..4800843 - 264 WP_014908078.1 PTS sugar transporter subunit IIB -
M8Y70_RS23390 (4800973) 4800973..4801146 + 174 WP_032414379.1 hypothetical protein -
M8Y70_RS23395 (4801149) 4801149..4801892 + 744 WP_002886905.1 MurR/RpiR family transcriptional regulator -
M8Y70_RS23400 (4802249) 4802249..4804387 + 2139 WP_004186701.1 anaerobic ribonucleoside-triphosphate reductase -
M8Y70_RS23405 (4804629) 4804629..4805093 + 465 WP_004222151.1 anaerobic ribonucleoside-triphosphate reductase-activating protein -
M8Y70_RS23410 (4805097) 4805097..4805381 - 285 WP_004178374.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
M8Y70_RS23415 (4805371) 4805371..4805613 - 243 WP_032434351.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin
M8Y70_RS23420 (4805691) 4805691..4807601 - 1911 WP_004152270.1 PRD domain-containing protein -
M8Y70_RS23425 (4807624) 4807624..4808778 - 1155 WP_002886900.1 lactonase family protein -
M8Y70_RS23430 (4808844) 4808844..4809584 - 741 WP_002886899.1 KDGP aldolase family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(5-83)

Antitoxin

RelB antitoxin/Antitoxin DinJ

(1-68)


Sequences

Toxin        


Download         Length: 95 a.a.        Molecular weight: 11155.97 Da        Isoelectric Point: 10.3787

>T245404 WP_004178374.1 NZ_CP097415:c4805381-4805097 [Klebsiella pneumoniae]
MTYELEFDPRAWREWQKPGETVKKQFKNKLQQIVQNPRIESTRLSDLPDCYKIKLKASGYRLVYQVRDSVVVVYVIAIGK
REKAAVYHQANKRL

Download         Length: 285 bp

Antitoxin


Download         Length: 81 a.a.        Molecular weight: 9003.47 Da        Isoelectric Point: 6.3340

>AT245404 WP_032434351.1 NZ_CP097415:c4805613-4805371 [Klebsiella pneumoniae]
MATLNVRLDDKLKKEAYAVLEKLDMTPTEAVRLLFQYIAENGRMPVKSMTISDGEAALLRTVRERLENPRPGGKVSLDDL

Download         Length: 243 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A6THG1

Antitoxin

Source ID Structure

References