Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relBE/RHH(antitoxin) |
| Location | 11512..12071 | Replicon | plasmid pP14-114 |
| Accession | NZ_CP097382 | ||
| Organism | Providencia stuartii strain P14 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | A0A427HAI4 |
| Locus tag | M8G38_RS21400 | Protein ID | WP_038601436.1 |
| Coordinates | 11793..12071 (+) | Length | 93 a.a. |
Antitoxin (Protein)
| Gene name | relB | Uniprot ID | - |
| Locus tag | M8G38_RS21395 | Protein ID | WP_249890932.1 |
| Coordinates | 11512..11793 (+) | Length | 94 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M8G38_RS21370 (M8G38_21370) | 7285..8025 | + | 741 | WP_282562176.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| M8G38_RS21375 (M8G38_21375) | 7911..9797 | + | 1887 | WP_282562181.1 | conjugal transfer protein TraN | - |
| M8G38_RS21380 (M8G38_21380) | 9779..10567 | + | 789 | WP_249890931.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| M8G38_RS21385 (M8G38_21385) | 10578..10886 | + | 309 | WP_282554873.1 | hypothetical protein | - |
| M8G38_RS21390 (M8G38_21390) | 10886..11410 | + | 525 | WP_052038320.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| M8G38_RS21395 (M8G38_21395) | 11512..11793 | + | 282 | WP_249890932.1 | ribbon-helix-helix domain-containing protein | Antitoxin |
| M8G38_RS21400 (M8G38_21400) | 11793..12071 | + | 279 | WP_038601436.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| M8G38_RS21405 (M8G38_21405) | 12345..12743 | + | 399 | WP_038601438.1 | hypothetical protein | - |
| M8G38_RS21410 (M8G38_21410) | 12859..13062 | + | 204 | WP_249890933.1 | hypothetical protein | - |
| M8G38_RS21415 (M8G38_21415) | 13258..14634 | + | 1377 | WP_038601440.1 | conjugal transfer pilus assembly protein TraH | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Non-Mobilizable plasmid | - | - | 1..114876 | 114876 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|