Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) /BrnT(toxin)
Location 2363320..2363806 Replicon chromosome
Accession NZ_CP097329
Organism Pseudanabaena mucicola str. Chao 1806

Toxin (Protein)


Gene name - Uniprot ID -
Locus tag M4D78_RS11500 Protein ID WP_286390209.1
Coordinates 2363320..2363583 (+) Length 88 a.a.

Antitoxin (Protein)


Gene name - Uniprot ID -
Locus tag M4D78_RS11505 Protein ID WP_286390211.1
Coordinates 2363573..2363806 (+) Length 78 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
M4D78_RS11490 2361668..2361817 + 150 WP_286390207.1 hypothetical protein -
M4D78_RS11495 2362697..2363242 - 546 Protein_2258 transposase -
M4D78_RS11500 2363320..2363583 + 264 WP_286390209.1 BrnT family toxin Toxin
M4D78_RS11505 2363573..2363806 + 234 WP_286390211.1 CopG family transcriptional regulator Antitoxin
M4D78_RS11510 2364123..2364959 - 837 WP_286390213.1 TPM domain-containing protein -
M4D78_RS11515 2365059..2365898 + 840 WP_286390215.1 ribosome biogenesis GTPase YlqF -
M4D78_RS11520 2365981..2366907 + 927 WP_286390217.1 ribonuclease HI -
M4D78_RS11525 2366973..2367386 + 414 WP_286390219.1 element excision factor XisH family protein -
M4D78_RS11530 2367374..2367718 + 345 WP_286390222.1 XisI protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Ribonuclease toxin, BrnT, of type II toxin-antitoxin system

(6-81)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 88 a.a.        Molecular weight: 10469.79 Da        Isoelectric Point: 8.4753

>T245164 WP_286390209.1 NZ_CP097329:2363320-2363583 [Pseudanabaena mucicola str. Chao 1806]
MRNFEYDEDKSQSNFAKHGIDFVEAQKLWNDPNLLEIPSRIQDEPRFVVIGKINSKHWSGVITYRDQNIRIIYVRRSRTQ
EVALYER

Download         Length: 264 bp

Antitoxin


Download         Length: 78 a.a.        Molecular weight: 8784.03 Da        Isoelectric Point: 4.3855

>AT245164 WP_286390211.1 NZ_CP097329:2363573-2363806 [Pseudanabaena mucicola str. Chao 1806]
MNAKDFDQKFDDGEEDIIEMLDLSQAKRPLASQKRLSIELPIWMIELINQEAKRLGVTPQTIVQTSLAEHLAVSNFN

Download         Length: 234 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References