Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) PumA-relB/upstrm_HI1419-dnstrm_HI1420
Location 1000617..1001203 Replicon chromosome
Accession NZ_CP097329
Organism Pseudanabaena mucicola str. Chao 1806

Toxin (Protein)


Gene name PumA Uniprot ID -
Locus tag M4D78_RS04770 Protein ID WP_286394865.1
Coordinates 1000913..1001203 (-) Length 97 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag M4D78_RS04765 Protein ID WP_286394864.1
Coordinates 1000617..1000904 (-) Length 96 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
M4D78_RS04735 996147..997436 + 1290 WP_286394860.1 adenosylhomocysteinase -
M4D78_RS04740 997568..998131 - 564 WP_286394861.1 IS630 family transposase -
M4D78_RS04745 998655..998939 - 285 WP_286394862.1 hypothetical protein -
M4D78_RS04750 999303..999609 - 307 Protein_934 clan AA aspartic protease -
M4D78_RS04755 999606..999821 - 216 Protein_935 hypothetical protein -
M4D78_RS04760 999843..1000484 - 642 WP_286394863.1 hypothetical protein -
M4D78_RS04765 1000617..1000904 - 288 WP_286394864.1 putative addiction module antidote protein Antitoxin
M4D78_RS04770 1000913..1001203 - 291 WP_286394865.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
M4D78_RS04775 1001221..1001406 + 186 WP_286394866.1 hypothetical protein -
M4D78_RS04780 1001794..1002201 + 408 WP_286394867.1 EVE domain-containing protein -
M4D78_RS04785 1002459..1003358 + 900 WP_286394868.1 transposase family protein -
M4D78_RS04790 1003418..1004068 - 651 WP_286394869.1 uracil phosphoribosyltransferase -
M4D78_RS04795 1004273..1005568 - 1296 WP_286394870.1 PrsW family glutamic-type intramembrane protease -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Addiction module killer protein, predicted

(1-96)

Antitoxin

Uncharacterized protein HI1420

(3-94)


Sequences

Toxin        


Download         Length: 97 a.a.        Molecular weight: 11110.85 Da        Isoelectric Point: 10.6868

>T245163 WP_286394865.1 NZ_CP097329:c1001203-1000913 [Pseudanabaena mucicola str. Chao 1806]
MIEIRETKIYSRWFKSLRDREARARIDIRIRRLSMGNPGDVKPIGKGVSELRIDYGAGYRVYFIQRGNTLIILLAGGDKR
TQDRDIKTALDLSENL

Download         Length: 291 bp

Antitoxin


Download         Length: 96 a.a.        Molecular weight: 10270.68 Da        Isoelectric Point: 4.5994

>AT245163 WP_286394864.1 NZ_CP097329:c1000904-1000617 [Pseudanabaena mucicola str. Chao 1806]
MNKVTTSLWDPAEHLETKEDMAAYLEAALEDGDPNLVVAALGDIARSKGMTNVARETGLGRESLYKSLSIDGNPEFATVL
RVIQSLGIRLRATPV

Download         Length: 288 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References