Detailed information of TA system
Overview
TA module
Type | IV | Classification (family/domain) | cptAB/Cpta(toxin) |
Location | 825032..825692 | Replicon | chromosome |
Accession | NZ_CP097262 | ||
Organism | Salmonella enterica subsp. enterica strain B3-6 |
Toxin (Protein)
Gene name | cptA | Uniprot ID | Q57K70 |
Locus tag | M3N94_RS03960 | Protein ID | WP_000244756.1 |
Coordinates | 825279..825692 (+) | Length | 138 a.a. |
Antitoxin (Protein)
Gene name | cptB | Uniprot ID | S5MU13 |
Locus tag | M3N94_RS03955 | Protein ID | WP_000351186.1 |
Coordinates | 825032..825298 (+) | Length | 89 a.a. |
Genomic Context
Location: 822552..822863 (312 bp)
Type: Others
Protein ID: WP_001182976.1
Type: Others
Protein ID: WP_001182976.1
Location: 823027..823686 (660 bp)
Type: Others
Protein ID: WP_000250289.1
Type: Others
Protein ID: WP_000250289.1
Location: 825032..825298 (267 bp)
Type: Antitoxin
Protein ID: WP_000351186.1
Type: Antitoxin
Protein ID: WP_000351186.1
Location: 825279..825692 (414 bp)
Type: Toxin
Protein ID: WP_000244756.1
Type: Toxin
Protein ID: WP_000244756.1
Location: 826379..827275 (897 bp)
Type: Others
Protein ID: WP_000434302.1
Type: Others
Protein ID: WP_000434302.1
Location: 827299..828012 (714 bp)
Type: Others
Protein ID: WP_000745614.1
Type: Others
Protein ID: WP_000745614.1
Location: 828018..829751 (1734 bp)
Type: Others
Protein ID: WP_000813389.1
Type: Others
Protein ID: WP_000813389.1
Location: 820961..822394 (1434 bp)
Type: Others
Protein ID: WP_001230141.1
Type: Others
Protein ID: WP_001230141.1
Location: 823802..824782 (981 bp)
Type: Others
Protein ID: WP_000874176.1
Type: Others
Protein ID: WP_000874176.1
Location: 825745..826266 (522 bp)
Type: Others
Protein ID: WP_001055885.1
Type: Others
Protein ID: WP_001055885.1
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Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
M3N94_RS03935 (820961) | 820961..822394 | - | 1434 | WP_001230141.1 | 6-phospho-beta-glucosidase BglA | - |
M3N94_RS03940 (822552) | 822552..822863 | + | 312 | WP_001182976.1 | N(4)-acetylcytidine aminohydrolase | - |
M3N94_RS03945 (823027) | 823027..823686 | + | 660 | WP_000250289.1 | hemolysin III family protein | - |
M3N94_RS03950 (823802) | 823802..824782 | - | 981 | WP_000874176.1 | tRNA-modifying protein YgfZ | - |
M3N94_RS03955 (825032) | 825032..825298 | + | 267 | WP_000351186.1 | FAD assembly factor SdhE | Antitoxin |
M3N94_RS03960 (825279) | 825279..825692 | + | 414 | WP_000244756.1 | protein YgfX | Toxin |
M3N94_RS03965 (825745) | 825745..826266 | - | 522 | WP_001055885.1 | flavodoxin FldB | - |
M3N94_RS03970 (826379) | 826379..827275 | + | 897 | WP_000434302.1 | site-specific tyrosine recombinase XerD | - |
M3N94_RS03975 (827299) | 827299..828012 | + | 714 | WP_000745614.1 | bifunctional protein-disulfide isomerase/oxidoreductase DsbC | - |
M3N94_RS03980 (828018) | 828018..829751 | + | 1734 | WP_000813389.1 | single-stranded-DNA-specific exonuclease RecJ | - |
Associated MGEs
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MGE detail | Similar MGEs | Relative position | MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
No matching records found |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 138 a.a. Molecular weight: 16183.15 Da Isoelectric Point: 10.7537
>T245074 WP_000244756.1 NZ_CP097262:825279-825692 [Salmonella enterica subsp. enterica]
VVLWQSDLRVSWRAQWISLLIHGLVAAVILLMPWPLSYTPLWMILLSLVVFDCVRSQRRINTCQGEIKLLMDGRLRWQGQ
DWTLLRPPWLLKSGMVLRLRAESGRHQHLWLAADSMEEAEWRELRRILLQQPISGQH
VVLWQSDLRVSWRAQWISLLIHGLVAAVILLMPWPLSYTPLWMILLSLVVFDCVRSQRRINTCQGEIKLLMDGRLRWQGQ
DWTLLRPPWLLKSGMVLRLRAESGRHQHLWLAADSMEEAEWRELRRILLQQPISGQH
Download Length: 414 bp
Antitoxin
Structures
Toxin
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Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A3Z1E9V5 |
Antitoxin
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Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A5I0YWH4 |