Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/YafQ-DinJ
Location 156726..157276 Replicon chromosome
Accession NZ_CP097093
Organism MAG: Mogibacterium diversum isolate JCVI-JB-Md32

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag M3I20_RS00685 Protein ID WP_273451619.1
Coordinates 156995..157276 (+) Length 94 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag M3I20_RS00680 Protein ID WP_273451617.1
Coordinates 156726..156998 (+) Length 91 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
M3I20_RS00665 (M3I20_00670) 152351..153199 + 849 WP_273451611.1 DUF1963 domain-containing protein -
M3I20_RS00670 (M3I20_00675) 153250..153735 + 486 WP_273451613.1 pyridoxamine 5'-phosphate oxidase family protein -
M3I20_RS00675 (M3I20_00680) 154001..156580 + 2580 WP_273451615.1 FctA domain-containing protein -
M3I20_RS00680 (M3I20_00685) 156726..156998 + 273 WP_273451617.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin
M3I20_RS00685 (M3I20_00690) 156995..157276 + 282 WP_273451619.1 type II toxin-antitoxin system YafQ family toxin Toxin
M3I20_RS00690 (M3I20_00695) 157299..157988 - 690 WP_273451621.1 TraX family protein -
M3I20_RS00695 (M3I20_00700) 158055..159080 - 1026 WP_106057918.1 Cna B-type domain-containing protein -
M3I20_RS00700 (M3I20_00705) 159492..161195 + 1704 WP_273451624.1 isopeptide-forming domain-containing fimbrial protein -
M3I20_RS00705 (M3I20_00710) 161296..162177 + 882 WP_273451626.1 class C sortase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, YafQ-like toxin

(3-92)

Antitoxin

RelB antitoxin/Antitoxin DinJ

(6-68)


Sequences

Toxin        


Download         Length: 94 a.a.        Molecular weight: 10804.68 Da        Isoelectric Point: 9.9845

>T244767 WP_273451619.1 NZ_CP097093:156995-157276 [Mogibacterium diversum]
MKYSIKFTSQFKKDLKLAKKQGKNLNKLFEVVDALATGKTLEAKYRDHNLSGKYSATRECHIEPDWLLVYEIIDESLVLI
LYRIGSHAKLFKL

Download         Length: 282 bp

Antitoxin


Download         Length: 91 a.a.        Molecular weight: 10092.47 Da        Isoelectric Point: 4.6536

>AT244767 WP_273451617.1 NZ_CP097093:156726-156998 [Mogibacterium diversum]
MPSTNLNIRTEKEVKEKADQIFSELGLNMTTAINIFLRTAIREHGIPFSLKLDIPNEATVNAIEEGRRIAFDKSAESYSN
IDELKAALDI

Download         Length: 273 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References