Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mazEF/MazF(toxin)
Location 1682254..1682870 Replicon chromosome
Accession NZ_CP096848
Organism Mycobacterium tuberculosis variant bovis strain Mb0486

Toxin (Protein)


Gene name mazF Uniprot ID G0TJ74
Locus tag M1778_RS07950 Protein ID WP_003407593.1
Coordinates 1682553..1682870 (+) Length 106 a.a.

Antitoxin (Protein)


Gene name mazE Uniprot ID G0TJ73
Locus tag M1778_RS07945 Protein ID WP_003900349.1
Coordinates 1682254..1682556 (+) Length 101 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
M1778_RS07935 (M1778_07935) 1678140..1679987 + 1848 WP_003407585.1 methylmalonyl-CoA mutase small subunit -
M1778_RS07940 (M1778_07940) 1679988..1682240 + 2253 WP_003407587.1 methylmalonyl-CoA mutase -
M1778_RS07945 (M1778_07945) 1682254..1682556 + 303 WP_003900349.1 type II toxin-antitoxin system antitoxin MazE4 Antitoxin
M1778_RS07950 (M1778_07950) 1682553..1682870 + 318 WP_003407593.1 type II toxin-antitoxin system toxin endoribonuclease MazF4 Toxin
M1778_RS07955 (M1778_07955) 1682867..1683871 + 1005 WP_003407596.1 methylmalonyl Co-A mutase-associated GTPase MeaB -
M1778_RS07960 (M1778_07960) 1683924..1685213 + 1290 WP_003407599.1 serine hydrolase domain-containing protein -
M1778_RS07965 (M1778_07965) 1685286..1685903 - 618 WP_003407606.1 class I SAM-dependent methyltransferase -
M1778_RS07970 (M1778_07970) 1686117..1686308 - 192 WP_003407609.1 dodecin family protein -
M1778_RS07975 (M1778_07975) 1686390..1686788 + 399 WP_003900351.1 hypothetical protein -
M1778_RS07980 (M1778_07980) 1686833..1687861 + 1029 WP_003407612.1 glycosyltransferase family 2 protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase PemK-like

(6-99)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 106 a.a.        Molecular weight: 11377.97 Da        Isoelectric Point: 7.9950

>T244047 WP_003407593.1 NZ_CP096848:1682553-1682870 [Mycobacterium tuberculosis variant bovis]
VNAPLRGQVYRCDLGYGAKPWLIVSNNARNRHTADVVAVRLTTTRRTIPTWVAMGPSDPLTGYVNADNIETLGKDELGDY
LGEVTPATMNKINTALATALGLPWP

Download         Length: 318 bp

Antitoxin


Download         Length: 101 a.a.        Molecular weight: 11173.42 Da        Isoelectric Point: 9.5564

>AT244047 WP_003900349.1 NZ_CP096848:1682254-1682556 [Mycobacterium tuberculosis variant bovis]
VPFLVALSGIISGVRDHSMTVRLDQQTRQRLQDIVKGGYRSANAAIVDAINKRWEALHDEQLDAAYAAAIHDNPAYPYES
EAERSAARARRNARQQRSAQ

Download         Length: 303 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
PDB 5XE3
PDB 5XE2

Antitoxin

Source ID Structure
PDB 5XE3
AlphaFold DB G0TJ73

References