244000

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mazEF/PemK(toxin)
Location 2303323..2303959 Replicon chromosome
Accession NZ_CP096847
Organism Mycobacterium tuberculosis variant bovis strain Mb0531

Toxin (Protein)


Gene name mazF Uniprot ID P0CL62
Locus tag M1773_RS10750 Protein ID WP_003410654.1
Coordinates 2303549..2303959 (+) Length 137 a.a.

Antitoxin (Protein)


Gene name mazE Uniprot ID P9WJ84
Locus tag M1773_RS10745 Protein ID WP_003410651.1
Coordinates 2303323..2303556 (+) Length 78 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
M1773_RS10730 (M1773_10735) 2298771..2299172 + 402 WP_009937711.1 metal ABC transporter permease -
M1773_RS10735 (M1773_10740) 2299173..2299577 - 405 WP_003410645.1 PPOX class F420-dependent oxidoreductase -
M1773_RS10740 (M1773_10745) 2299661..2303245 - 3585 WP_010950652.1 cobaltochelatase subunit CobN -
M1773_RS10745 (M1773_10750) 2303323..2303556 + 234 WP_003410651.1 type II toxin-antitoxin system antitoxin MazE7 Antitoxin
M1773_RS10750 (M1773_10755) 2303549..2303959 + 411 WP_003410654.1 type II toxin-antitoxin system toxin endoribonuclease MazF7 Toxin
M1773_RS10755 (M1773_10760) 2303943..2305034 + 1092 WP_003900454.1 precorrin-3B synthase -
M1773_RS10760 (M1773_10765) 2305044..2305670 + 627 WP_003410658.1 precorrin-8X methylmutase -
M1773_RS10765 (M1773_10770) 2305667..2307193 + 1527 WP_003410659.1 precorrin-2 C(20)-methyltransferase -
M1773_RS10770 (M1773_10775) 2307139..2308362 - 1224 WP_003901321.1 class I SAM-dependent methyltransferase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase PemK-like

(5-110)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 137 a.a.        Molecular weight: 14235.42 Da        Isoelectric Point: 10.6228

>T244000 WP_003410654.1 NZ_CP096847:2303549-2303959 [Mycobacterium tuberculosis variant bovis]
MAEPRRGDLWLVSLGAARAGEPGKHRPAVVVSVDELLTGIDDELVVVVPVSSSRSRTPLRPPVAPSEGVAADSVAVCRGV
RAVARARLVERLGALKPATMRAIENALTLILGLPTGPERGEAATHSPVRWTGGRDP

Download         Length: 411 bp

Antitoxin


Download         Length: 78 a.a.        Molecular weight: 8450.25 Da        Isoelectric Point: 4.7954

>AT244000 WP_003410651.1 NZ_CP096847:2303323-2303556 [Mycobacterium tuberculosis variant bovis]
MSTSTTIRVSTQTRDRLAAQARERGISMSALLTELAAQAERQAIFRAEREASHAETTTQAVRDEDREWEGTVGDGLG

Download         Length: 234 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
PDB 7DU4
PDB 5WYG
PDB 6A6X

Antitoxin

Source ID Structure
AlphaFold DB A0A7U4BV50

References