Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) cptAB/-
Location 450580..451233 Replicon chromosome
Accession NZ_CP096759
Organism Acinetobacter baumannii strain 5653

Toxin (Protein)


Gene name cptA Uniprot ID -
Locus tag M1S26_RS02185 Protein ID WP_000607077.1
Coordinates 450844..451233 (+) Length 130 a.a.

Antitoxin (Protein)


Gene name cptB Uniprot ID V5V966
Locus tag M1S26_RS02180 Protein ID WP_001288210.1
Coordinates 450580..450837 (+) Length 86 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
M1S26_RS02160 (M1S26_02160) 446096..447103 + 1008 WP_000198631.1 DNA-directed RNA polymerase subunit alpha -
M1S26_RS02165 (M1S26_02165) 447122..447499 + 378 WP_001216380.1 50S ribosomal protein L17 -
M1S26_RS02170 (M1S26_02170) 447681..449171 + 1491 WP_000415125.1 NAD(P)/FAD-dependent oxidoreductase -
M1S26_RS02175 (M1S26_02175) 449220..450392 - 1173 WP_001190542.1 acyl-CoA dehydrogenase family protein -
M1S26_RS02180 (M1S26_02180) 450580..450837 + 258 WP_001288210.1 succinate dehydrogenase assembly factor 2 Antitoxin
M1S26_RS02185 (M1S26_02185) 450844..451233 + 390 WP_000607077.1 membrane protein Toxin
M1S26_RS02190 (M1S26_02190) 452003..453088 + 1086 WP_000049106.1 hypothetical protein -
M1S26_RS02195 (M1S26_02195) 453166..453732 + 567 WP_000651538.1 rhombosortase -
M1S26_RS02200 (M1S26_02200) 453920..456115 + 2196 WP_001158906.1 TRAP transporter large permease subunit -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Flavinator of succinate dehydrogenase

(10-82)


Sequences

Toxin        


Download         Length: 130 a.a.        Molecular weight: 15552.88 Da        Isoelectric Point: 10.4313

>T243330 WP_000607077.1 NZ_CP096759:450844-451233 [Acinetobacter baumannii]
MINHLNFKLKYSRFSIIFQFFIGLSLAVLFYQLMPLLWWLVVISLLFISFIFFLKRPQLAQIAYLDKKLWSLAYKSQNTV
SRVKILKIIDCQIFIVIYFEGHKTLTSIIWFDQMSLAEWKKLKTLEKLY

Download         Length: 390 bp

>T243330 NZ_OW970553:2051060-2051162 [Klebsiella pneumoniae]
GCAAGGCGACTTAGCCTGCATTAATGCCAACTTTTAGCGCACGGCTCTCTCCCAAGAGCCATTTCCCTGGACCGAATACA
GGAATCGTATTCGGTCTCTTTTT

Antitoxin


Download         Length: 86 a.a.        Molecular weight: 10318.77 Da        Isoelectric Point: 4.6150

>AT243330 WP_001288210.1 NZ_CP096759:450580-450837 [Acinetobacter baumannii]
MSEEMTLEERKVIYRARRGLKEIDVYFDPYVKNYYLKADPAEKALFAELVEQEDPDLLDWFMEVSEPPRTELRDFIYKLK
HYVHG

Download         Length: 258 bp

>AT243330 NZ_OW970553:c2051169-2051024 [Klebsiella pneumoniae]
TAAAGATAAAAAGAGACCGAATACGATTCCTGTATTCGGTCCAGGGAAATGGCTCTTGGGAGAGAGCCGTGCGCTAAAAG
TTGGCATTAATGCAGGCTAAGTCGCCTTGCACTATAAGAATAGTTTAACGCGTCAGCTTTTCCAGT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure
AlphaFold DB A0A7U4BQM7

References