Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) yeeUV (cbtA-cbeA)/CbtA-CbeA
Location 3240362..3241141 Replicon chromosome
Accession NZ_CP096201
Organism Kluyvera ascorbata strain SK

Toxin (Protein)


Gene name yeeV Uniprot ID -
Locus tag MY052_RS15540 Protein ID WP_248537373.1
Coordinates 3240764..3241141 (+) Length 126 a.a.

Antitoxin (Protein)


Gene name yeeU Uniprot ID -
Locus tag MY052_RS15535 Protein ID WP_248537372.1
Coordinates 3240362..3240715 (+) Length 118 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

CbtA toxin of type IV toxin-antitoxin system

(1-111)

Antitoxin

Antitoxin CbeA

(14-112)


Sequences

Toxin        


Download         Length: 126 a.a.        Molecular weight: 14001.07 Da        Isoelectric Point: 9.8955

>T242860 WP_248537373.1 NZ_CP096201:3240764-3241141 [Kluyvera ascorbata]
MQILSAPPARAALSRPSPVAVWQILLSHLLAQHYGLTLNDTPFSDETIIRKHIDAGISLSDAVNFIVEKYELVRTDRHGS
TVAEQSPFISSIDMFHARRATGLMKRRGYKTISNIITGVYRQEQP

Download         Length: 378 bp

>T242860 NZ_OW967966:2880743-2880850 [Escherichia coli]
ATGACGCTCGCGCAGTTTGCCATGACTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAATTATTACCGCAGTGAT
TGTCAGCTGGTGGCGTAACCGGAAGTAA

Antitoxin


Download         Length: 118 a.a.        Molecular weight: 13014.91 Da        Isoelectric Point: 6.9558

>AT242860 WP_248537372.1 NZ_CP096201:3240362-3240715 [Kluyvera ascorbata]
MKKDTVNKTTDTLQWGLKCDITPHFGARLVLEGNRLHYLADRASITGAFSEADLRHLDQAFPVLLKQLELMLTSGELNPR
HQHTVTLYAKGLTCEADTLGSCGYVYLAIYPTFTTAT

Download         Length: 354 bp

>AT242860 NZ_OW967966:c2880693-2880636 [Escherichia coli]
TCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References