Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) yfjZ-ypjF/CbtA-CbeA
Location 904171..904832 Replicon chromosome
Accession NZ_CP096201
Organism Kluyvera ascorbata strain SK

Toxin (Protein)


Gene name ypjF Uniprot ID -
Locus tag MY052_RS04375 Protein ID WP_248188259.1
Coordinates 904509..904832 (+) Length 108 a.a.

Antitoxin (Protein)


Gene name yfjZ Uniprot ID -
Locus tag MY052_RS04370 Protein ID WP_248538264.1
Coordinates 904171..904488 (+) Length 106 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Genomic island - - 881777..907510 25733


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

CbtA toxin of type IV toxin-antitoxin system

(1-107)

Antitoxin

Antitoxin CbeA

(5-104)


Sequences

Toxin        


Download         Length: 108 a.a.        Molecular weight: 12412.29 Da        Isoelectric Point: 5.6981

>T242848 WP_248188259.1 NZ_CP096201:904509-904832 [Kluyvera ascorbata]
MKSQPATTQRAAKPCLSPVDVWQMLLTRLLEQHYGLTLNDTPFSEERVIQEHIDAGITLADAINFLVEKYELVRIDRRGF
SWQEQTPYLTIIDIMRARLDLGLLNRN

Download         Length: 324 bp

>T242848 NZ_OW967966:281180-281287 [Escherichia coli]
ATGACGCTCGCAGAACTGGGCATGGCCTTCTGGCATGATTTAGCGGCTCCGGTCATTGCTGGCATTCTTGCCAGTCTGAT
CGTGAACTGGCTGAACAAGCGGAAGTAA

Antitoxin


Download         Length: 106 a.a.        Molecular weight: 12007.67 Da        Isoelectric Point: 7.6977

>AT242848 WP_248538264.1 NZ_CP096201:904171-904488 [Kluyvera ascorbata]
MSNITWGLQRDITPRLGARLVQEGNRLHYLAERASITGQFSDAECRKLDVAFPYFIRQMESMLTTGELNPRHTHCVTLYR
NGFTCEADTLGSCGYVYIAIYPTQR

Download         Length: 318 bp

>AT242848 NZ_OW967966:c281123-281068 [Escherichia coli]
TCAAGATTAGCCCCCGTGATGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References