Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) yeeUV (cbtA-cbeA)/CbtA-CbeA
Location 734701..735489 Replicon chromosome
Accession NZ_CP096201
Organism Kluyvera ascorbata strain SK

Toxin (Protein)


Gene name yeeV Uniprot ID -
Locus tag MY052_RS03520 Protein ID WP_181638367.1
Coordinates 734701..735078 (-) Length 126 a.a.

Antitoxin (Protein)


Gene name yeeU Uniprot ID -
Locus tag MY052_RS03525 Protein ID WP_181638366.1
Coordinates 735130..735489 (-) Length 120 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

CbtA toxin of type IV toxin-antitoxin system

(1-112)

Antitoxin

Antitoxin CbeA

(15-114)


Sequences

Toxin        


Download         Length: 126 a.a.        Molecular weight: 13922.78 Da        Isoelectric Point: 9.0116

>T242846 WP_181638367.1 NZ_CP096201:c735078-734701 [Kluyvera ascorbata]
MQTRQLSSTREASPRPTPVEIWQTLLTYLLERHYGLSLNDTQFGDGNVIHQHIDAGISLADALNFLVEKSELVRIDRPGF
SIQHQSPFISAIDILRARKATGLMQRTGYKAVTCAISGQSSRGQQ

Download         Length: 378 bp

>T242846 NZ_OW967966:280214-280321 [Escherichia coli]
ATGACGCTCGCAGAGCTGGGCATGGCCTTCTGGCATGATTTAGCGGCTCCGGTCATTGCTGGCATTCTTGCCAGTCTGAT
CGTGAACTGGCTGAATAAGCGGAAGTAA

Antitoxin


Download         Length: 120 a.a.        Molecular weight: 13180.08 Da        Isoelectric Point: 6.7424

>AT242846 WP_181638366.1 NZ_CP096201:c735489-735130 [Kluyvera ascorbata]
MQNPTNVASHDITEPWWGLKPAVIPCFGARLVQEGNRLHYLADRASITGTFSNADLRHLDQAFPVLMKQLELMLLSGELN
PRHQHCVTLYAKGLTCESDTLGSHGYVYLAIYPTSAITA

Download         Length: 360 bp

>AT242846 NZ_OW967966:c280165-280102 [Escherichia coli]
GTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References