Detailed information of TA system TA024174

Bioinformatically predicted

Overview

TA module

• Type: II
• Classification (family/domain): rlegTA/AbiEii-AbiEi
• Location: 4823742..4824592
• Replicon: chromosome
• Accession: NC_012997
• Organism: Teredinibacter turnerae T7901

Toxin (Protein)

• Gene name: rlegT
• Uniprot ID: -
• Locus tag: TERTU_RS21550
• Protein ID: WP_086011693.1
• Coordinates: 4823742..4823996 (-)
• Length: 85 a.a.

Antitoxin (Protein)

• Gene name: rlegA
• Uniprot ID: -
• Locus tag: TERTU_RS19360
• Protein ID: WP_041590462.1
• Coordinates: 4823993..4824592 (-)
• Length: 200 a.a.

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
TERTU_RS22065	4818851..4819060	+	210	WP_187148816.1	hypothetical protein	-
TERTU_RS19345	4819083..4819700	+	618	WP_187148817.1	endonuclease	-
TERTU_RS19350	4819787..4820758	+	972	WP_015817991.1	ATP-binding protein	-
TERTU_RS19355	4820774..4823146	+	2373	WP_015820256.1	S8 family peptidase	-
TERTU_RS21890	4823114..4823413	-	300	WP_143876323.1	helix-turn-helix domain-containing protein	-
TERTU_RS21550	4823742..4823996	-	255	WP_086011693.1	nucleotidyl transferase AbiEii/AbiGii toxin family protein	Toxin
TERTU_RS19360	4823993..4824592	-	600	WP_041590462.1	type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein	Antitoxin
TERTU_RS19365	4824796..4825326	-	531	WP_015816938.1	hypothetical protein	-
TERTU_RS19370	4825348..4826430	-	1083	WP_015817246.1	type III-B CRISPR module RAMP protein Cmr6	-
TERTU_RS19375	4826414..4826815	-	402	WP_015817724.1	type III-B CRISPR module-associated protein Cmr5	-
TERTU_RS19380	4826812..4827708	-	897	WP_015817966.1	type III-B CRISPR module RAMP protein Cmr4	-
TERTU_RS19385	4827724..4828911	-	1188	WP_015818380.1	type III-B CRISPR module-associated protein Cmr3	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• Nucleotidyl transferase AbiEii toxin, Type IV TA system (36-76)

Antitoxin

• Transcriptional regulator, AbiEi antitoxin (6-53)

Sequences

Toxin

Protein

• Length: 85 a.a.
• Molecular weight: 9870.46 Da
• Isoelectric Point: 10.7394

>T24174 WP_086011693.1 NC_012997:c4823996-4823742 [Teredinibacter turnerae T7901]
VINRNVASSVRARLLNHARETKQDFNLVLTRFCLERLLYRISISKYVNHFYLKGALLFDLWFDVPRRPTRDVDFLGFGPS
GWGI

Nucleotide

• Length: 255 bp

>T24174 NC_012997:c4823996-4823742 [Teredinibacter turnerae T7901]
GTGATCAACCGAAATGTGGCCTCTTCAGTACGAGCACGTCTACTCAATCATGCACGTGAAACGAAGCAAGACTTTAATCT
TGTGCTAACTCGATTCTGCCTTGAGCGCTTGTTATATCGGATCAGCATTTCCAAATATGTGAATCACTTTTATCTGAAAG
GTGCACTGCTATTTGATCTTTGGTTCGATGTCCCACGCAGGCCGACGCGAGATGTAGACTTTTTGGGATTTGGGCCATCT
GGCTGGGGAATATGA

Antitoxin

Protein

• Length: 200 a.a.
• Molecular weight: 22366.84 Da
• Isoelectric Point: 10.0960

>AT24174 WP_041590462.1 NC_012997:c4824592-4823993 [Teredinibacter turnerae T7901]
MKSAGQQILELARTQGLIRSRDISAQGLPRIALTRQVRDGQLVRVDRGLYALPNRQSSEHSSLAEVASKYPEGIICLLSA
LRVHELTTQSPFEVWLAIPHKGRAPKIDYPPLRIIRFSGKALTEGIEEHSVDGVTVKVSNVARTVADCFKFRNKIGLDVA
LEALREAWDSKRTSMDELWRYATILRVANIMRPYMESLS

Nucleotide

• Length: 600 bp

>AT24174 NC_012997:c4824592-4823993 [Teredinibacter turnerae T7901]
ATGAAAAGTGCCGGCCAACAAATCCTAGAATTAGCCCGTACCCAAGGACTTATCCGTTCCCGCGATATTTCCGCACAGGG
GCTGCCCCGCATCGCCCTCACTAGGCAAGTTCGGGATGGGCAACTGGTTCGAGTCGATCGCGGTTTGTATGCACTCCCTA
ACAGGCAGTCCTCAGAACATAGCTCACTTGCAGAAGTTGCCAGCAAATATCCTGAAGGAATCATTTGCCTACTCTCCGCG
TTGCGTGTACACGAACTTACCACGCAATCGCCATTTGAAGTTTGGCTTGCCATACCTCATAAAGGGCGAGCGCCGAAAAT
AGATTACCCGCCATTGCGAATTATTCGATTCTCAGGGAAAGCACTAACCGAGGGGATTGAAGAGCACTCAGTCGACGGAG
TAACTGTCAAAGTATCTAATGTCGCGCGTACGGTAGCCGACTGTTTTAAATTTCGAAATAAGATCGGGCTAGATGTTGCA
CTGGAAGCCCTACGAGAAGCTTGGGACAGCAAACGCACTAGCATGGATGAGCTGTGGCGGTACGCAACGATATTGCGAGT
TGCAAATATTATGCGGCCATACATGGAGAGTCTTTCGTGA