Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | /Xre(antitoxin) |
| Location | 457052..458206 | Replicon | chromosome |
| Accession | NC_012997 | ||
| Organism | Teredinibacter turnerae T7901 | ||
Toxin (Protein)
| Gene name | - | Uniprot ID | C5BMV7 |
| Locus tag | TERTU_RS01960 | Protein ID | WP_015819372.1 |
| Coordinates | 457442..458206 (+) | Length | 255 a.a. |
Antitoxin (Protein)
| Gene name | - | Uniprot ID | C5BMV6 |
| Locus tag | TERTU_RS01955 | Protein ID | WP_015820127.1 |
| Coordinates | 457052..457441 (+) | Length | 130 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TERTU_RS01930 | 453462..454310 | + | 849 | WP_015820761.1 | peptidyl-prolyl cis-trans isomerase | - |
| TERTU_RS01935 | 454312..455280 | + | 969 | WP_015820199.1 | HupE/UreJ family protein | - |
| TERTU_RS01940 | 455285..455887 | + | 603 | WP_015818006.1 | HupE/UreJ family protein | - |
| TERTU_RS01945 | 455884..456477 | + | 594 | WP_015819301.1 | HupE/UreJ family protein | - |
| TERTU_RS01950 | 456474..456884 | - | 411 | WP_015817410.1 | hypothetical protein | - |
| TERTU_RS01955 | 457052..457441 | + | 390 | WP_015820127.1 | DUF2384 domain-containing protein | Antitoxin |
| TERTU_RS01960 | 457442..458206 | + | 765 | WP_015819372.1 | RES family NAD+ phosphorylase | Toxin |
| TERTU_RS01965 | 458327..458872 | + | 546 | WP_015818323.1 | glutathione peroxidase | - |
| TERTU_RS01970 | 458934..460130 | - | 1197 | WP_015819775.1 | PHB depolymerase family esterase | - |
| TERTU_RS01975 | 460428..461477 | + | 1050 | WP_041590015.1 | hypothetical protein | - |
| TERTU_RS01980 | 461614..462567 | - | 954 | WP_041590016.1 | family 15 carbohydrate-binding domain-containing protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 255 a.a. Molecular weight: 28159.92 Da Isoelectric Point: 5.7110
>T24173 WP_015819372.1 NC_012997:457442-458206 [Teredinibacter turnerae T7901]
VQIAESVSQLPIALVPLVGLAWRVVETQGTAATRAITRNADEQLRLEQLLEGCKPPVPDACEKLSYLLATPFRYPPLRHG
SRYGTRWERGIFYAAQEQETALAETAVYLWLFQQGAVEMGPLAEITDARTVFSVRLRTGRGCDLAANHFQHIQAKLTEPG
NWGYTQALGTRLREMGADFFWFPSARLAGGTNVAVVNPESFASPTPDTQQLWNLRLTPELCWFGRADAGRDTSGYFEFSR
EVFAEAGALAHPCL
VQIAESVSQLPIALVPLVGLAWRVVETQGTAATRAITRNADEQLRLEQLLEGCKPPVPDACEKLSYLLATPFRYPPLRHG
SRYGTRWERGIFYAAQEQETALAETAVYLWLFQQGAVEMGPLAEITDARTVFSVRLRTGRGCDLAANHFQHIQAKLTEPG
NWGYTQALGTRLREMGADFFWFPSARLAGGTNVAVVNPESFASPTPDTQQLWNLRLTPELCWFGRADAGRDTSGYFEFSR
EVFAEAGALAHPCL
Download Length: 765 bp
>T24173 NC_012997:457442-458206 [Teredinibacter turnerae T7901]
GTGCAGATTGCCGAAAGTGTCAGCCAGTTACCGATAGCGCTGGTTCCGCTGGTAGGGCTTGCATGGCGTGTTGTTGAAAC
CCAGGGTACGGCAGCCACCCGCGCGATTACCCGCAATGCGGACGAACAGTTGCGCCTGGAGCAATTGTTGGAAGGTTGTA
AGCCGCCCGTGCCCGATGCGTGCGAAAAGCTGTCCTATTTATTGGCGACGCCTTTCCGTTACCCCCCGTTACGCCACGGT
TCACGCTATGGTACCCGCTGGGAGCGAGGAATTTTTTATGCGGCCCAGGAGCAGGAAACCGCACTGGCAGAAACGGCGGT
TTACTTGTGGCTGTTTCAGCAGGGTGCGGTGGAGATGGGCCCATTGGCTGAAATCACCGATGCGCGCACTGTATTTTCTG
TGCGACTGCGCACAGGTCGCGGCTGCGACCTGGCGGCAAACCACTTTCAGCATATTCAAGCCAAACTAACCGAGCCCGGC
AATTGGGGGTACACCCAGGCGTTGGGTACTCGGCTGCGGGAAATGGGGGCAGATTTTTTCTGGTTTCCGTCGGCGCGTTT
AGCCGGGGGCACCAACGTCGCCGTGGTTAATCCAGAGAGTTTTGCCAGCCCGACCCCAGATACTCAGCAATTGTGGAATT
TACGGCTCACACCTGAATTATGCTGGTTTGGCAGGGCAGATGCCGGACGTGACACGAGCGGCTATTTTGAGTTCAGCCGC
GAAGTGTTCGCCGAGGCTGGCGCGCTGGCGCACCCGTGCCTGTAA
GTGCAGATTGCCGAAAGTGTCAGCCAGTTACCGATAGCGCTGGTTCCGCTGGTAGGGCTTGCATGGCGTGTTGTTGAAAC
CCAGGGTACGGCAGCCACCCGCGCGATTACCCGCAATGCGGACGAACAGTTGCGCCTGGAGCAATTGTTGGAAGGTTGTA
AGCCGCCCGTGCCCGATGCGTGCGAAAAGCTGTCCTATTTATTGGCGACGCCTTTCCGTTACCCCCCGTTACGCCACGGT
TCACGCTATGGTACCCGCTGGGAGCGAGGAATTTTTTATGCGGCCCAGGAGCAGGAAACCGCACTGGCAGAAACGGCGGT
TTACTTGTGGCTGTTTCAGCAGGGTGCGGTGGAGATGGGCCCATTGGCTGAAATCACCGATGCGCGCACTGTATTTTCTG
TGCGACTGCGCACAGGTCGCGGCTGCGACCTGGCGGCAAACCACTTTCAGCATATTCAAGCCAAACTAACCGAGCCCGGC
AATTGGGGGTACACCCAGGCGTTGGGTACTCGGCTGCGGGAAATGGGGGCAGATTTTTTCTGGTTTCCGTCGGCGCGTTT
AGCCGGGGGCACCAACGTCGCCGTGGTTAATCCAGAGAGTTTTGCCAGCCCGACCCCAGATACTCAGCAATTGTGGAATT
TACGGCTCACACCTGAATTATGCTGGTTTGGCAGGGCAGATGCCGGACGTGACACGAGCGGCTATTTTGAGTTCAGCCGC
GAAGTGTTCGCCGAGGCTGGCGCGCTGGCGCACCCGTGCCTGTAA
Antitoxin
Download Length: 130 a.a. Molecular weight: 14042.40 Da Isoelectric Point: 9.5513
>AT24173 WP_015820127.1 NC_012997:457052-457441 [Teredinibacter turnerae T7901]
MKPSIVQSDSAIVANALLDACPSLGITQDQLAQVLGVSRATVARIKKKASTHQADEAIAPSSKPFELALLVIRVYRSLYA
IVGGNVDAMKHWMNTPNHHLNLQKPIDLIQTALGLSEVIWYLDAMRGKI
MKPSIVQSDSAIVANALLDACPSLGITQDQLAQVLGVSRATVARIKKKASTHQADEAIAPSSKPFELALLVIRVYRSLYA
IVGGNVDAMKHWMNTPNHHLNLQKPIDLIQTALGLSEVIWYLDAMRGKI
Download Length: 390 bp
>AT24173 NC_012997:457052-457441 [Teredinibacter turnerae T7901]
ATGAAGCCGTCCATTGTGCAGAGTGATAGCGCGATTGTTGCCAATGCGTTACTCGATGCCTGTCCATCTCTGGGGATCAC
CCAGGATCAGTTGGCTCAGGTACTCGGCGTTTCCCGCGCAACGGTGGCGCGCATTAAGAAAAAGGCCAGCACCCATCAGG
CCGATGAAGCGATCGCCCCCAGCAGCAAGCCGTTTGAGCTGGCGCTGCTGGTTATTCGTGTTTACCGCTCGCTCTACGCC
ATTGTAGGTGGCAACGTCGATGCGATGAAACACTGGATGAACACGCCAAACCACCATCTCAATTTACAGAAGCCCATCGA
CCTCATTCAAACCGCTCTGGGCCTCAGCGAAGTCATCTGGTATCTGGATGCCATGCGGGGAAAAATTTAA
ATGAAGCCGTCCATTGTGCAGAGTGATAGCGCGATTGTTGCCAATGCGTTACTCGATGCCTGTCCATCTCTGGGGATCAC
CCAGGATCAGTTGGCTCAGGTACTCGGCGTTTCCCGCGCAACGGTGGCGCGCATTAAGAAAAAGGCCAGCACCCATCAGG
CCGATGAAGCGATCGCCCCCAGCAGCAAGCCGTTTGAGCTGGCGCTGCTGGTTATTCGTGTTTACCGCTCGCTCTACGCC
ATTGTAGGTGGCAACGTCGATGCGATGAAACACTGGATGAACACGCCAAACCACCATCTCAATTTACAGAAGCCCATCGA
CCTCATTCAAACCGCTCTGGGCCTCAGCGAAGTCATCTGGTATCTGGATGCCATGCGGGGAAAAATTTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|