Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relBE/Phd(antitoxin) |
| Location | 889897..890462 | Replicon | chromosome |
| Accession | NZ_CP095187 | ||
| Organism | Pseudoxanthomonas sp. F37 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | - |
| Locus tag | MUU77_RS04075 | Protein ID | WP_245091883.1 |
| Coordinates | 890208..890462 (+) | Length | 85 a.a. |
Antitoxin (Protein)
| Gene name | relB | Uniprot ID | - |
| Locus tag | MUU77_RS04070 | Protein ID | WP_245091881.1 |
| Coordinates | 889897..890154 (+) | Length | 86 a.a. |
Genomic Context
Location: 884957..885421 (465 bp)
Type: Others
Protein ID: WP_245091869.1
Type: Others
Protein ID: WP_245091869.1
Location: 888048..889031 (984 bp)
Type: Others
Protein ID: WP_245091875.1
Type: Others
Protein ID: WP_245091875.1
Location: 889157..889504 (348 bp)
Type: Others
Protein ID: WP_245091877.1
Type: Others
Protein ID: WP_245091877.1
Location: 889501..889878 (378 bp)
Type: Others
Protein ID: WP_245091879.1
Type: Others
Protein ID: WP_245091879.1
Location: 889897..890154 (258 bp)
Type: Antitoxin
Protein ID: WP_245091881.1
Type: Antitoxin
Protein ID: WP_245091881.1
Location: 890208..890462 (255 bp)
Type: Toxin
Protein ID: WP_245091883.1
Type: Toxin
Protein ID: WP_245091883.1
Location: 885425..886399 (975 bp)
Type: Others
Protein ID: WP_245091871.1
Type: Others
Protein ID: WP_245091871.1
Location: 886421..887875 (1455 bp)
Type: Others
Protein ID: WP_245091873.1
Type: Others
Protein ID: WP_245091873.1
Location: 890469..890837 (369 bp)
Type: Others
Protein ID: WP_245091884.1
Type: Others
Protein ID: WP_245091884.1
Location: 890948..891718 (771 bp)
Type: Others
Protein ID: WP_245091886.1
Type: Others
Protein ID: WP_245091886.1
Location: 891715..892977 (1263 bp)
Type: Others
Protein ID: WP_245094208.1
Type: Others
Protein ID: WP_245094208.1
Location: 893118..893831 (714 bp)
Type: Others
Protein ID: WP_245091892.1
Type: Others
Protein ID: WP_245091892.1
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Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MUU77_RS04040 (MUU77_04040) | 884957..885421 | + | 465 | WP_245091869.1 | DUF6265 family protein | - |
| MUU77_RS04045 (MUU77_04045) | 885425..886399 | - | 975 | WP_245091871.1 | cysteine synthase A | - |
| MUU77_RS04050 (MUU77_04050) | 886421..887875 | - | 1455 | WP_245091873.1 | siroheme synthase CysG | - |
| MUU77_RS04055 (MUU77_04055) | 888048..889031 | + | 984 | WP_245091875.1 | LysR family transcriptional regulator | - |
| MUU77_RS04060 (MUU77_04060) | 889157..889504 | + | 348 | WP_245091877.1 | hypothetical protein | - |
| MUU77_RS04065 (MUU77_04065) | 889501..889878 | + | 378 | WP_245091879.1 | DUF2809 domain-containing protein | - |
| MUU77_RS04070 (MUU77_04070) | 889897..890154 | + | 258 | WP_245091881.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin |
| MUU77_RS04075 (MUU77_04075) | 890208..890462 | + | 255 | WP_245091883.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| MUU77_RS04080 (MUU77_04080) | 890469..890837 | - | 369 | WP_245091884.1 | hypothetical protein | - |
| MUU77_RS04085 (MUU77_04085) | 890948..891718 | - | 771 | WP_245091886.1 | LytTR family DNA-binding domain-containing protein | - |
| MUU77_RS04090 (MUU77_04090) | 891715..892977 | - | 1263 | WP_245094208.1 | histidine kinase | - |
| MUU77_RS04095 (MUU77_04095) | 893118..893831 | - | 714 | WP_245091892.1 | phosphoadenylyl-sulfate reductase | - |
Associated MGEs
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MGE detail | Similar MGEs | Relative position | MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| No matching records found | |||||||
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 85 a.a. Molecular weight: 9788.41 Da Isoelectric Point: 12.1370
>T241699 WP_245091883.1 NZ_CP095187:890208-890462 [Pseudoxanthomonas sp. F37]
VDNRAAAIERVRRVFAHVDHLADHPDSGRRPPELKRGRYRQIVEPPCRVFHRSEPGRVLILHVMRSERLLRPGMLQARKP
GKAR
VDNRAAAIERVRRVFAHVDHLADHPDSGRRPPELKRGRYRQIVEPPCRVFHRSEPGRVLILHVMRSERLLRPGMLQARKP
GKAR
Download Length: 255 bp
>T241699 NZ_OD940434:595249-595365 [Enterococcus faecalis]
ATGTTTTTGTCCGTTGAAGCAGCGCTAGGACTGATGATTGGTTTTGCAACACTTGTTGTGACCATTATCTTCGGTATCTT
AGCGCTTGTCTTAGACAACAAAAATAACCGTTCATAA
ATGTTTTTGTCCGTTGAAGCAGCGCTAGGACTGATGATTGGTTTTGCAACACTTGTTGTGACCATTATCTTCGGTATCTT
AGCGCTTGTCTTAGACAACAAAAATAACCGTTCATAA
Antitoxin
Download Length: 86 a.a. Molecular weight: 9375.80 Da Isoelectric Point: 9.2325
>AT241699 WP_245091881.1 NZ_CP095187:889897-890154 [Pseudoxanthomonas sp. F37]
MRTELVTTLKRQATGLLADVERDRQPILITQHGLPSAYRVDVETCETLLSRMAVLEGIARGEQAVAEGRAVAHPQARDRL
ARGLK
MRTELVTTLKRQATGLLADVERDRQPILITQHGLPSAYRVDVETCETLLSRMAVLEGIARGEQAVAEGRAVAHPQARDRL
ARGLK
Download Length: 258 bp
>AT241699 NZ_OD940434:c595481-595276 [Enterococcus faecalis]
AAAAGAGAGATATGCAGGAACATACCTCTCTAATAGCCACTACTAGTTATAAGAACTAGCGGCTTACTGAGTTATTGGTT
TTATTTCAAACGCTTAACCGTTCAGCTCCTCAAAGCTTATGAACGGTTATTTTTGTTGTCTAAGACAAGCGCTAAGATAC
CGAAGATAATGGTCACAACAAGTGTTGCAAAACCAATCATCAGTCC
AAAAGAGAGATATGCAGGAACATACCTCTCTAATAGCCACTACTAGTTATAAGAACTAGCGGCTTACTGAGTTATTGGTT
TTATTTCAAACGCTTAACCGTTCAGCTCCTCAAAGCTTATGAACGGTTATTTTTGTTGTCTAAGACAAGCGCTAAGATAC
CGAAGATAATGGTCACAACAAGTGTTGCAAAACCAATCATCAGTCC