Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mazEF/MazF(toxin)
Location 1232621..1233252 Replicon chromosome
Accession NZ_CP095023
Organism Mycobacterium tuberculosis strain SGF0702019

Toxin (Protein)


Gene name mazF Uniprot ID A0A7U4F9D0
Locus tag MUW68_RS05885 Protein ID WP_003405820.1
Coordinates 1232621..1232932 (-) Length 104 a.a.

Antitoxin (Protein)


Gene name mazE Uniprot ID G0TGZ7
Locus tag MUW68_RS05890 Protein ID WP_003405836.1
Coordinates 1232932..1233252 (-) Length 107 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
MUW68_RS05865 (MUW68_05865) 1228102..1229526 - 1425 WP_003405805.1 class II fumarate hydratase -
MUW68_RS05870 (MUW68_05870) 1229557..1230645 - 1089 WP_003898726.1 class II fructose-bisphosphatase -
MUW68_RS05875 (MUW68_05875) 1230701..1231345 + 645 WP_003915494.1 DUF4245 domain-containing protein -
MUW68_RS05880 (MUW68_05880) 1231352..1232509 - 1158 WP_003898727.1 AI-2E family transporter -
MUW68_RS05885 (MUW68_05885) 1232621..1232932 - 312 WP_003405820.1 type II toxin-antitoxin system toxin endoribonuclease MazF3 Toxin
MUW68_RS05890 (MUW68_05890) 1232932..1233252 - 321 WP_003405836.1 type II toxin-antitoxin system antitoxin MazE3 Antitoxin
MUW68_RS05895 (MUW68_05895) 1233262..1234798 + 1537 Protein_1162 carboxylesterase/lipase family protein -
MUW68_RS05900 (MUW68_05900) 1234805..1235917 - 1113 WP_003405840.1 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase -
MUW68_RS05905 (MUW68_05905) 1235927..1236184 - 258 WP_003405844.1 exodeoxyribonuclease VII small subunit -
MUW68_RS05910 (MUW68_05910) 1236174..1237421 - 1248 WP_003405846.1 exodeoxyribonuclease VII large subunit -
MUW68_RS05915 (MUW68_05915) 1237418..1238056 - 639 WP_003898730.1 lipid droplet-associated protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase PemK-like

(8-85)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 104 a.a.        Molecular weight: 11061.82 Da        Isoelectric Point: 4.9371

>T241150 WP_003405820.1 NZ_CP095023:c1232932-1232621 [Mycobacterium tuberculosis]
MRPIHIAQLDKARPVLILTREVVRPHLTNVTVAPITTTVRGLATEVPVDAVNGLNQPSVVSCDNIQTIPVCDLGRQIGYL
LASQEPALAEAIGNAFDLDWVVA

Download         Length: 312 bp

>T241150 NZ_LT907990:333949-334215 [Vibrio cholerae]
ATGATTAAATTTGAATTTGATGAAAACAAAAGCAGAAGTAATCTCGAAAAGCACGGTATTGATTTTCATACAGCTCAAGG
ATTGTGGAATGATTCAGATCTTATCGAGATCCCTGCTAACACGAGTGATGAGCCCAGATATTTGGTTGTCGGCTTACTAA
ACGGTAAGCATTGGTCAGGAGTAATTACCTACCGAGGTACGAATATCAGGATCATCTCAGTTCGGCGTTCACGGAAAGCG
GAGGTAAGCCTTTATGAAAGCGCATGA

Antitoxin


Download         Length: 107 a.a.        Molecular weight: 11394.83 Da        Isoelectric Point: 5.1236

>AT241150 WP_003405836.1 NZ_CP095023:c1233252-1232932 [Mycobacterium tuberculosis]
MYLPWGVVLAGGANGFGAGAYQTGTICEVSTQIAVRLPDEIVAFIDDEVRGQHARSRAAVVLRALERERRRRLAERDAEI
LATNTSATGDLDTLAGHCARTALDID

Download         Length: 321 bp

>AT241150 NZ_LT907990:334202-334447 [Vibrio cholerae]
ATGAAAGCGCATGAATTTGATGCCAAGTTTGAAAGTGACGACGATGATATCGTAATGGACTTGGATCTATCGCAAGCTAA
AAGACCGATGCATAAGCAAAAACGAGTCAATGTAGATTTTCCAGCCTGGATGCTTGAGTCCTTGGACAGAGAAGCGAGTC
GTATTGGTGTAACACGTCAATCAATCATTAAAATTTGGCTGGCAGAAAGGTTAGAGAGCGTGTCTCATCATTCAAGTGTG
AGATAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A7U4F9D0

Antitoxin

Source ID Structure
AlphaFold DB G0TGZ7

References