Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/RelE(toxin)
Location 3345583..3346195 Replicon chromosome
Accession NZ_CP094998
Organism Synechocystis sp. PCC 6803 substr. GT-T

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag MT986_RS15615 Protein ID WP_010874170.1
Coordinates 3345833..3346195 (+) Length 121 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag MT986_RS15610 Protein ID WP_010874169.1
Coordinates 3345583..3345843 (+) Length 87 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
MT986_RS15595 (MT986_15595) 3342669..3343421 - 753 WP_223211306.1 hypothetical protein -
MT986_RS15600 (MT986_15600) 3343503..3344459 - 957 WP_010874167.1 quinolinate synthase NadA -
MT986_RS15605 (MT986_15605) 3344552..3345298 - 747 WP_010874168.1 cytochrome c biogenesis protein CcdA -
MT986_RS15610 (MT986_15610) 3345583..3345843 + 261 WP_010874169.1 hypothetical protein Antitoxin
MT986_RS15615 (MT986_15615) 3345833..3346195 + 363 WP_010874170.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
MT986_RS15620 (MT986_15620) 3346332..3348938 + 2607 WP_010874171.1 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase -
MT986_RS15625 (MT986_15625) 3349168..3349995 + 828 WP_010874172.1 hypothetical protein -
MT986_RS15630 (MT986_15630) 3350324..3350845 + 522 WP_010874173.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin HigB-2

(37-110)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 121 a.a.        Molecular weight: 13679.59 Da        Isoelectric Point: 8.2767

>T240920 WP_010874170.1 NZ_CP094998:3345833-3346195 [Synechocystis sp. PCC 6803]
MSNNLHLVNIDFTPEYRRSLKYLAKKYRNIRSDVQPIIEALQKGVISGDRLAGFGSDIYVYKLRIKNSNIQKGKSSGYRL
IYLLESENSILLLTIYSKAEQEDIAASDINSILGEYSIED

Download         Length: 363 bp

>T240920 NZ_LT859959:c6104816-6104475 [Bradyrhizobium sp. ORS 285]
ATGGCAACGACACGCTTCGACGCGGCGGAATACCTGGCGGAGCCGGAGGCACAGGCCGAGTTTCTGGCGGCGGCGCTCGA
GGATGGCACCGCGGATGAGATCCGCGCCGCGATCAACACCATCGCGCGGGCGCGCGGCATGTCGGACCTCGCGAAGGCGA
CCGGCATCCGTCGCGAGCAGCTTTATCGGGCGCTGGGCGAGGACGGGAATCCGGAGTTTGCCACCATCCTGACCGTGCTC
CGTGCGCTCGGGGTGAAGCTGACGTCGGCGCCGGCGAAGGGGGCGTCAAAGGCGGCTCCGAAGCGGAAGACGGCGAAGAA
GGTTGGGCGGCGCGCTGCGTAA

Antitoxin


Download         Length: 87 a.a.        Molecular weight: 9909.29 Da        Isoelectric Point: 4.3705

>AT240920 WP_010874169.1 NZ_CP094998:3345583-3345843 [Synechocystis sp. PCC 6803]
MMRAFEVMATVKDSKQLLLDSDLHWNTSRVKVIILESDELASKGSEFDPDDTPVEEIKVSLRKALEEYKQGKRIPVENMW
EGIDVE

Download         Length: 261 bp

>AT240920 NZ_LT859959:c6105113-6104820 [Bradyrhizobium sp. ORS 285]
ATGGTCGAAATCCGGCAAACGGCCGAGTTCAAGGCGTGGCTGCTCGGCCTGCGCGATCTGAAGGCAAAAGCCAGGATCGC
CGCGCGGATCGAGCGGGCCGCGAATGGCAATCTCGGCGACAGCAAGCCGGTCGGCGAGGGCGTCTCCGAGATGCGGATCG
ATTACGGCCCGGGCTACCGGATCTACTATCGGCAGCGTGGAGACGTCCTGGTCATCCTGCTCTGTGGTGGCGACAAGAGC
ACGCAACAGTCGGACATCCGGCGCGCCCAGGCACTGGCGAAGAGAGAGGCATAG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References