Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | tsbAT/- |
Location | 1026668..1027418 | Replicon | chromosome |
Accession | NZ_CP094820 | ||
Organism | Mammaliicoccus sciuri strain IVB6225 |
Toxin (Protein)
Gene name | tsbT | Uniprot ID | - |
Locus tag | MUA89_RS05210 | Protein ID | WP_224658872.1 |
Coordinates | 1027272..1027418 (+) | Length | 49 a.a. |
Antitoxin (Protein)
Gene name | tsbA | Uniprot ID | - |
Locus tag | MUA89_RS05205 | Protein ID | WP_262643003.1 |
Coordinates | 1026668..1027267 (+) | Length | 200 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
MUA89_RS05180 (MUA89_05190) | 1021909..1022670 | + | 762 | WP_262642999.1 | acetylglutamate kinase | - |
MUA89_RS05185 (MUA89_05195) | 1023602..1024729 | + | 1128 | WP_262643001.1 | tRNA epoxyqueuosine(34) reductase QueG | - |
MUA89_RS05190 (MUA89_05200) | 1024733..1025206 | + | 474 | WP_025904798.1 | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | - |
MUA89_RS05195 (MUA89_05205) | 1025241..1025381 | - | 141 | WP_162841915.1 | hypothetical protein | - |
MUA89_RS05200 (MUA89_05210) | 1025468..1026619 | + | 1152 | WP_262643002.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
MUA89_RS05205 (MUA89_05215) | 1026668..1027267 | + | 600 | WP_262643003.1 | glucosamine-6-phosphate isomerase | Antitoxin |
MUA89_RS05210 (MUA89_05220) | 1027272..1027418 | + | 147 | WP_224658872.1 | SAS053 family protein | Toxin |
MUA89_RS05215 (MUA89_05225) | 1027572..1028960 | + | 1389 | WP_262643005.1 | class II fumarate hydratase | - |
MUA89_RS05220 (MUA89_05230) | 1029050..1030576 | + | 1527 | WP_262643007.1 | exopolyphosphatase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 49 a.a. Molecular weight: 5713.12 Da Isoelectric Point: 3.8403
>T240611 WP_224658872.1 NZ_CP094820:1027272-1027418 [Mammaliicoccus sciuri]
VRNLNKNLEEENEMVQDLEDVKELGKEMEQISEQNDEAFEEKKSEQES
VRNLNKNLEEENEMVQDLEDVKELGKEMEQISEQNDEAFEEKKSEQES
Download Length: 147 bp
>T240611 NZ_LT598688:c2592131-2591865 [Staphylococcus aureus]
ATGAGCAATTACACGGTTAAGATTAAAAATTCAGCGAAATCAGATTTAAAGAAAATAAAACATTCTTATTTAAAGAAGTC
ATTTTTAGAAATTGTTGAGACTTTAAAAAATGATCCGTATAAAATAACACAATCTTTTGAAAAATTAGAGCCTAAATATT
TAGAGCGATATTCAAGAAGAATTAACCATCAGCACAGGGTCGTCTATACCGTAGATGATCGAAATAAAGAAGTATTAATA
CTATCGGCATGGTCACATTATGATTAA
ATGAGCAATTACACGGTTAAGATTAAAAATTCAGCGAAATCAGATTTAAAGAAAATAAAACATTCTTATTTAAAGAAGTC
ATTTTTAGAAATTGTTGAGACTTTAAAAAATGATCCGTATAAAATAACACAATCTTTTGAAAAATTAGAGCCTAAATATT
TAGAGCGATATTCAAGAAGAATTAACCATCAGCACAGGGTCGTCTATACCGTAGATGATCGAAATAAAGAAGTATTAATA
CTATCGGCATGGTCACATTATGATTAA
Antitoxin
Download Length: 200 a.a. Molecular weight: 22321.18 Da Isoelectric Point: 4.8551
>AT240611 WP_262643003.1 NZ_CP094820:1026668-1027267 [Mammaliicoccus sciuri]
MALNFKVFETKDIAARYTADVVRKQFNSDSTSVVGVHLEAEQTSFFDELLDDVKKNPVNFSQIHILDFDGKEDYYTELGV
PAKQVLKTDVGSDVEAFIKEKVNTDKKKNKLMLDVVTLTEDSRTGLDYDQAIHPAREVIVLVTGKEKAKAVSQLYQEPAN
GSVESAKLKQHRMVTVVLDNEAAQGLPEDVRSYFSIQFS
MALNFKVFETKDIAARYTADVVRKQFNSDSTSVVGVHLEAEQTSFFDELLDDVKKNPVNFSQIHILDFDGKEDYYTELGV
PAKQVLKTDVGSDVEAFIKEKVNTDKKKNKLMLDVVTLTEDSRTGLDYDQAIHPAREVIVLVTGKEKAKAVSQLYQEPAN
GSVESAKLKQHRMVTVVLDNEAAQGLPEDVRSYFSIQFS
Download Length: 600 bp
>AT240611 NZ_LT598688:c2592388-2592131 [Staphylococcus aureus]
ATGATTATCACTAGCCCTACAGAAGCGAGAAAAGATTTTTATCAATTACTAAAAAATGTTAATAATAATCACGAACCAAT
TTATATTAGTGGCAATAATGCCGAAAATAATGCTGTGATTATAGGTTTAGAAGATTGGAAAAGTATACAAGAGACAATAT
ATCTTGAATCTACTGGTACAATGGACAAAGTAAGAGAAAGAGAAAAAGATAATAGTGGTACAACAAATATAGATGATATT
GATTGGGATAATCTTTAA
ATGATTATCACTAGCCCTACAGAAGCGAGAAAAGATTTTTATCAATTACTAAAAAATGTTAATAATAATCACGAACCAAT
TTATATTAGTGGCAATAATGCCGAAAATAATGCTGTGATTATAGGTTTAGAAGATTGGAAAAGTATACAAGAGACAATAT
ATCTTGAATCTACTGGTACAATGGACAAAGTAAGAGAAAGAGAAAAAGATAATAGTGGTACAACAAATATAGATGATATT
GATTGGGATAATCTTTAA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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